VIMSS748221 has 354 amino acids
Query: DUF92 [M=251]
Accession: PF01940.20
Description: Integral membrane protein DUF92
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-62 197.8 17.2 1.1e-62 197.8 17.2 2.4 2 VIMSS748221
Domain annotation for each sequence (and alignments):
>> VIMSS748221
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 0.5 3.0 0.018 0.018 157 204 .. 35 85 .. 2 99 .. 0.68
2 ! 197.8 17.2 1.1e-62 1.1e-62 2 250 .. 122 340 .. 121 341 .. 0.91
Alignments for each domain:
== domain 1 score: 0.5 bits; conditional E-value: 0.018
DUF92 157 llGtlagllGalliallalllll..lakqlklillvtla.GllGsllDSll 204
l+G +ag++G +l + ++++++ +l+l+l+++++ ++++ ll S+l
VIMSS748221 35 LVGFVAGVAGQVLGTRIQAAVGEgaAVVDLPLVLFLAASgAFVAALLRSVL 85
566677776666666554444443322266666665555356777776665 PP
== domain 2 score: 197.8 bits; conditional E-value: 1.1e-62
DUF92 2 lalllaalayrkksltlsGalaavlvgvlillaplglaffllllvFfllgsllTkvkkeeKekaglaeekegaRdavqVlanglvalllallyalles 99
+++ll++l+y+ ++++l G+l++vl+ +l+++ +g+ +f++l++Ff lg l Tk++++eK ++g+aee+egaR+ +Vlan++val++++++a +
VIMSS748221 122 VTVLLGYLSYALDTASLPGMLTGVLLSFLTIVL-GGFGWFAMLITFFGLGGLSTKYRYDEKLDRGIAEENEGARGSGNVLANSIVALFAVVAAA-ASP 217
789*****************************9.999***************************************************999965.444 PP
DUF92 100 kellaelssllllgfvaslaaalaDTlaSElGkllskkprlittlkkvppGtnGgVsllGtlagllGalliallallllllakqlklillvtlaGllG 197
+++ l++++f++++aaa+ DT++SE+G l+ ++prlittl++v+pGt+GgV+++G++ag++Ga +ia + ++l++++ ++ + +++l+Gl+G
VIMSS748221 218 SHIA-VDPLLFFYAFAGAVAAAMTDTFSSEFGGLY-DNPRLITTLRPVEPGTDGGVTWQGVAAGAAGAGIIAGI-AALTQDI-STVGSGVILLCGLVG 311
4444.2456799********************999.9***********************************99.5677555.8889999******** PP
DUF92 198 sllDSllGAtlqasvvdketgkvvekkvkesrkisGldlldNeaVNllstllg 250
+++DSllGAt++ s +++N++VN+l+tl++
VIMSS748221 312 MTVDSLLGATVEGS------------------------VVGNQGVNMLATLAA 340
**************........................677777777777765 PP
Or compare VIMSS748221 to CDD or PaperBLAST