PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS11773 to PF01973 (MptE-like)

VIMSS11773 has 264 amino acids

Query:       MptE-like  [M=171]
Accession:   PF01973.22
Description: 6-hydroxymethylpterin diphosphokinase MptE-like
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-17   50.3   0.1    1.9e-17   49.7   0.1    1.3  1  VIMSS11773  


Domain annotation for each sequence (and alignments):
>> VIMSS11773  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.7   0.1   1.9e-17   1.9e-17      13     169 ..      40     185 ..      33     187 .. 0.77

  Alignments for each domain:
  == domain 1  score: 49.7 bits;  conditional E-value: 1.9e-17
   MptE-like  13 psleellnkfkgnkpaiivgaGPSLekn.lellkelrdkaviiaadsalkaLlkegIkPDivvslDpqevsyevlkeaekkgsivlvfasgvnpellkk 110
                 + l++ +n++ g ++a+iv +GPSL +    llk    +++ +  + +     k +++P  +v + p  ++ +  + +++   i+l++ s       + 
  VIMSS11773  40 HRLKQYENQYVG-QKAVIVCNGPSLLQTdFSLLK----NIYTFGLNKINLLFDKSDFRPSCIVAVNPLVIEQN-ASFYNNT-TIPLFINSK----HTSL 127
                 667888888888.***********9776488888....6799*************************666666.4455554.787775443....3333 PP

   MptE-like 111 ykgpkl.flvtgttqalellseekgeilfgGgsvanaavdlAvelgfkeIiliGqDlayt 169
                 +k++ + ++ ++t q +++  ++ +++lf G +v+  a++lA ++gf+++ liG+D++++
  VIMSS11773 128 IKPRENiIFLHSTEQ-IKFA-QDCSISLFHGSTVTFVAMQLAFYFGFSKVALIGCDHSFR 185
                 444444244555555.4444.555669******************************996 PP



Or compare VIMSS11773 to CDD or PaperBLAST