PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS67694 to PF01982 (CTP-dep_RFKase)

VIMSS67694 has 220 amino acids

Query:       CTP-dep_RFKase  [M=121]
Accession:   PF01982.20
Description: Domain of unknown function DUF120
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    2.1e-48  149.6   0.1    3.3e-48  149.0   0.1    1.3  1  VIMSS67694  


Domain annotation for each sequence (and alignments):
>> VIMSS67694  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  149.0   0.1   3.3e-48   3.3e-48       1     121 []      99     218 ..      99     218 .. 0.99

  Alignments for each domain:
  == domain 1  score: 149.0 bits;  conditional E-value: 3.3e-48
  CTP-dep_RFKase   1 VvsGlgeGkyyvslegykeqfeeklgfePypGTLNvkldeeslelrkaleklkgieiegfeeeertfgevkaypakiegieaavvvperthyped 95 
                     V+sG+geG+yyv +++y  qf+eklg+ Py GTLN+k+d++sl + ++++ ++gi+iegf++e+rtfg+vka+paki++i++ v++pert y +d
      VIMSS67694  99 VTSGMGEGRYYVARKQYIIQFQEKLGIIPYLGTLNIKVDQASLPELRKIRGFRGIHIEGFKTEDRTFGSVKAFPAKIQNIPCFVIMPERTVY-TD 192
                     89******************************************************************************************.9* PP

  CTP-dep_RFKase  96 vlEiiapvkLReklelkdgdeveiev 121
                     v+Eii++++LRe+++l+dgd+v++ev
      VIMSS67694 193 VIEIISDKYLREEINLHDGDRVSVEV 218
                     ************************97 PP



Or compare VIMSS67694 to CDD or PaperBLAST