PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS939485 to PF01982 (CTP-dep_RFKase)

VIMSS939485 has 211 amino acids

Query:       CTP-dep_RFKase  [M=121]
Accession:   PF01982.20
Description: Domain of unknown function DUF120
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      2e-43  133.5   0.0    3.1e-43  132.9   0.0    1.3  1  VIMSS939485  


Domain annotation for each sequence (and alignments):
>> VIMSS939485  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.9   0.0   3.1e-43   3.1e-43       1     121 []      92     209 ..      92     209 .. 0.97

  Alignments for each domain:
  == domain 1  score: 132.9 bits;  conditional E-value: 3.1e-43
  CTP-dep_RFKase   1 VvsGlgeGkyyvslegykeqfeeklgfePypGTLNvkldeeslelrkaleklkgieiegfeeeertfgevkaypakiegieaavvvperthyped 95 
                     VvsGlgeG+yyv++  y+  +ee+lgf+P+pGTLNvk+  + +++ +a+ ++++++i+gf +++rtfg+vkayp++i gi++a+vvp+rt +p++
     VIMSS939485  92 VVSGLGEGAYYVRQ--YEPLIEEYLGFKPFPGTLNVKILFP-KTVLDAVCNIRPVIIPGFVKDGRTFGDVKAYPVMIGGIKGAIVVPSRTIHPPR 183
                     89************..**********************999.567888999******************************************** PP

  CTP-dep_RFKase  96 vlEiiapvkLReklelkdgdeveiev 121
                     + Eiiapv+LRe+l+lkdgd+v++ev
     VIMSS939485 184 IAEIIAPVNLREALKLKDGDRVRLEV 209
                     **********************9986 PP



Or compare VIMSS939485 to CDD or PaperBLAST