PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS157689 to PF02130 (YbeY)

VIMSS157689 has 161 amino acids

Query:       YbeY  [M=129]
Accession:   PF02130.21
Description: Endoribonuclease YbeY
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      7e-51  157.7   0.3    7.9e-51  157.5   0.3    1.0  1  VIMSS157689  


Domain annotation for each sequence (and alignments):
>> VIMSS157689  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  157.5   0.3   7.9e-51   7.9e-51       6     128 ..      18     156 ..      13     157 .. 0.97

  Alignments for each domain:
  == domain 1  score: 157.5 bits;  conditional E-value: 7.9e-51
         YbeY   6 eleklikkvleaalkeeklkkeaelsvllvdneeikelnkeyrnkdkpTDVLSFpleeeeee................lGDivisvekaeeqaeeygh 87 
                  e ++l++++l+ a++++k+++ +els+++++ne i+e+n+eyr+kd++TDV+SF+lee  +                 lGDi+is+ekaeeqa++ygh
  VIMSS157689  18 EDKQLVENILQFAAEYLKIEQGTELSLTFTTNEGIREINREYRDKDQATDVISFALEEMGDGeteidwgefdletprmLGDIIISTEKAEEQAKDYGH 115
                  66899******************************************************9999*********************************** PP

         YbeY  88 slerelafllvHglLHLlGYDHeeeeeekeMeekeeeilkk 128
                  + +rel+fl+vHglLHLlGYDH+e++eek+M+ +++e+l++
  VIMSS157689 116 TKARELGFLAVHGLLHLLGYDHMEPDEEKVMFGLQKEVLDA 156
                  **************************************986 PP



Or compare VIMSS157689 to CDD or PaperBLAST