PaperBLAST – Find papers about a protein or its homologs

 

Align BRENDA::A0A101IGG2 to PF02153 (PDH_N)

BRENDA::A0A101IGG2 has 310 amino acids

Query:       PDH_N  [M=154]
Accession:   PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence           Description
    ------- ------ -----    ------- ------ -----   ---- --  --------           -----------
      3e-29   87.7   0.0    4.3e-29   87.2   0.0    1.2  1  BRENDA::A0A101IGG2  


Domain annotation for each sequence (and alignments):
>> BRENDA::A0A101IGG2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.2   0.0   4.3e-29   4.3e-29       1     153 [.      26     167 ..      26     168 .. 0.95

  Alignments for each domain:
  == domain 1  score: 87.2 bits;  conditional E-value: 4.3e-29
               PDH_N   1 laralrrkgfkvtvigydideekakaalelglvdeatddieavkeadivllavPvevilevlkelaphlkedalitDvgsvKekvvkelek 91 
                         +a++ +++gf v++ g +   +k + a++lg++++++  +++v + d+vll+vP++ +++v++e+ap ++++ l++Dv+s K++++k++ +
  BRENDA::A0A101IGG2  26 FAKYFKEHGFLVSIWGPS---GKVEVAERLGVKFARDL-MAEVAKSDVVLLSVPIKETAKVVEEVAPRMRPGSLLMDVTSLKAEPMKAMLR 112
                         799*************86...556667899*******9.9*************************************************** PP

               PDH_N  92 llk.gksfvgghPmaGteksGvdaareelfenavviLtPtektdkealelvkelleevgarvi 153
                           + g+++ g+hPm+G+              ++ viL P +    e+l  + e+++e garv+
  BRENDA::A0A101IGG2 113 WAPdGVEVLGTHPMFGP--------TIPTIRGQTVILVPAAGRCDEWLLPMEEIFQEDGARVE 167
                         *****************........9999*************999****************97 PP



Or compare BRENDA::A0A101IGG2 to CDD or PaperBLAST