PaperBLAST – Find papers about a protein or its homologs

 

Align BRENDA::G7J2E9 to PF02153 (PDH_N)

BRENDA::G7J2E9 has 268 amino acids

Query:       PDH_N  [M=154]
Accession:   PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.3e-13   35.2   0.0    6.6e-13   34.6   0.0    1.3  1  BRENDA::G7J2E9  


Domain annotation for each sequence (and alignments):
>> BRENDA::G7J2E9  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   34.6   0.0   6.6e-13   6.6e-13      29     113 ..      47     132 ..      22     146 .. 0.79

  Alignments for each domain:
  == domain 1  score: 34.6 bits;  conditional E-value: 6.6e-13
           PDH_N  29 elglvdeatddieavkea..divllavPvevilevlkelap.hlkedalitDvgsvKekvvkelekllk.gksfvgghPmaGteksGvd 113
                     ++g+ + ++    a  +a  d++ll++ +  ++ev+  +    lk+  l +Dv svKe++ + l k+l+ +  +  +hPm+G+  sG +
  BRENDA::G7J2E9  47 QMGIHFFRDI--TAFLDAdmDVILLCTSISSLSEVVGSMPLaCLKRPTLFVDVLSVKEHPKNLLLKVLPeESDILCTHPMFGP-VSGKN 132
                     5666665544..455555459*****************98768**************************9*************.77754 PP



Or compare BRENDA::G7J2E9 to CDD or PaperBLAST