D3S601 has 446 amino acids
Query: PDH_N [M=154]
Accession: PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.2e-51 157.7 0.4 3.3e-50 155.8 0.2 2.0 2 D3S601
Domain annotation for each sequence (and alignments):
>> D3S601
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 155.8 0.2 3.3e-50 3.3e-50 1 154 [] 21 166 .. 21 166 .. 0.98
2 ? -0.9 0.0 0.059 0.059 13 35 .. 416 438 .. 411 443 .. 0.84
Alignments for each domain:
== domain 1 score: 155.8 bits; conditional E-value: 3.3e-50
PDH_N 1 laralrrkgfkvtvigydideekakaalelglvdeatddieavkeadivllavPvevilevlkelaphlkedalitDvgsvKekvvkelekllk.gksfvggh 102
+ar+l+++gf+ +v+g+di+++k+++ elg+++ +++ +ea+k++div++avP++v+++v+ke+aph++e++l++D++s+Ke ++k++e+++k g++++++h
D3S601 21 FARYLKNRGFRIIVTGRDIEKGKNVER-ELGVEFLNNN-VEAAKKGDIVIVAVPINVTERVIKEVAPHVREGCLLMDITSIKEIPAKTMEENVKeGVTVIPTH 121
79************************9.**********.9*************************************************************** PP
PDH_N 103 PmaGteksGvdaareelfenavviLtPtek.tdkealelvkelleevgarvil 154
Pm+G+ ++ ++ ++vviLtP+ek +++e++++v+++l+ ga+vi+
D3S601 122 PMFGP--------STPSLLRQVVILTPSEKhKNTEWFKKVYNFLKREGAKVIV 166
*****........99**************989******************985 PP
== domain 2 score: -0.9 bits; conditional E-value: 0.059
PDH_N 13 tvigydideekakaalelglvde 35
+++gy++de k+ +++ l++v +
D3S601 416 RIYGYSKDELKNIEKEFLNIVKN 438
79*********999999998866 PP
Or compare D3S601 to CDD or PaperBLAST