PaperBLAST – Find papers about a protein or its homologs

 

Align G7J2F0 to PF02153 (PDH_N)

G7J2F0 has 239 amino acids

Query:       PDH_N  [M=154]
Accession:   PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    3.5e-13   35.5   0.0    5.1e-13   35.0   0.0    1.2  1  G7J2F0    


Domain annotation for each sequence (and alignments):
>> G7J2F0  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   35.0   0.0   5.1e-13   5.1e-13      29     113 ..      47     132 ..      22     146 .. 0.79

  Alignments for each domain:
  == domain 1  score: 35.0 bits;  conditional E-value: 5.1e-13
   PDH_N  29 elglvdeatddieavkea..divllavPvevilevlkelap.hlkedalitDvgsvKekvvkelekllk.gksfvgghPmaGteksGvd 113
             ++g+ + ++    a  +a  d++ll++ +  ++ev+  +    lk+  l +Dv svKe++ + l k+l+ +  +  +hPm+G+  sG +
  G7J2F0  47 QMGIHFFRDI--TAFLDAdmDVILLCTSISSLSEVVGSMPLaCLKRPTLFVDVLSVKEHPKNLLLKVLPeESDILCTHPMFGP-VSGKN 132
             5666666544..455555459*****************98768**************************9*************.77754 PP



Or compare G7J2F0 to CDD or PaperBLAST