VIMSS330917 has 365 amino acids
Query: PDH_N [M=154] Accession: PF02153.21 Description: Prephenate dehydrogenase, nucleotide-binding domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3e-39 120.2 0.2 4.3e-39 119.6 0.2 1.2 1 VIMSS330917 Domain annotation for each sequence (and alignments): >> VIMSS330917 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 119.6 0.2 4.3e-39 4.3e-39 1 151 [. 16 168 .. 16 171 .. 0.94 Alignments for each domain: == domain 1 score: 119.6 bits; conditional E-value: 4.3e-39 PDH_N 1 laralrrkgfkvtvigydideekakaalelglvdeatdd.ieavkeadivllavPvevilevlkelap.hlkedalitDvgsvKekvvkelekllk.g 95 la+++++ +++v +ig+d+d+ + + a++ g++d+ +d + +++ad+++la Pv+vi l+ la lk ++l+tDvgs+K+ v++++ ++ + g VIMSS330917 16 LALSIKQAHPTVHIIGIDRDDVSLSYARQQGMIDASGTDlAAVASDADVIILAGPVDVIVADLHRLAMmPLKAGVLVTDVGSTKQVVMHAALAIQQhG 113 699************************************45556899*****************999867*********************9999999 PP PDH_N 96 ksfvgghPmaGteksGvdaareelfenavviLtPtektdkealelvkelleevgar 151 ++f+gghPmaG++ksGv a+r++lfena++ L P t++ a++ ++ ll+ + ++ VIMSS330917 114 VTFIGGHPMAGSHKSGVTAGRANLFENAFYLLVPGR-TNQAAVQRLQALLQATHVK 168 ***********************************9.999********99988776 PP
Or compare VIMSS330917 to CDD or PaperBLAST