VIMSS533718 has 440 amino acids
Query: PDH_N [M=154]
Accession: PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-42 130.6 0.1 3.3e-42 129.8 0.1 1.4 1 VIMSS533718
Domain annotation for each sequence (and alignments):
>> VIMSS533718
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 129.8 0.1 3.3e-42 3.3e-42 1 154 [] 16 161 .. 16 161 .. 0.97
Alignments for each domain:
== domain 1 score: 129.8 bits; conditional E-value: 3.3e-42
PDH_N 1 laralrrkgfkvtvigydideekakaalelglvdeatddieavkeadivllavPvevilevlkelaphlkedalitDvgsvKekvvkelekllk.gks 97
+a +l+++g +v v+g+d ++k +++ elg+ +++++ i+a++++div+++vP++v++ v+ke+aph+k++ l++D++s+Ke+++k + ++ k g+
VIMSS533718 16 FASFLKNRGYDVLVSGRDVIKGKEVEK-ELGVTYTNNN-IDAAEKGDIVIISVPINVTESVIKEVAPHVKKGSLLMDITSIKERPAKLMAEFSKtGVF 111
6999***********************.**********.*******************************************************9999 PP
PDH_N 98 fvgghPmaGteksGvdaareelfenavviLtPtek.tdkealelvkelleevgarvil 154
+ ++hPm+G+ ++ +++++vviLtPtek + + +e++ke+le ga+vi+
VIMSS533718 112 VLPTHPMFGP--------ETPSLNRQVVILTPTEKeKTNPFFEKIKEFLEIEGAKVIV 161
99********........9***************97677899*************985 PP
Or compare VIMSS533718 to CDD or PaperBLAST