VIMSS6862625 has 396 amino acids
Query: PDH_N [M=154]
Accession: PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.3e-19 54.2 0.0 1.1e-18 53.4 0.0 1.4 1 VIMSS6862625
Domain annotation for each sequence (and alignments):
>> VIMSS6862625
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 53.4 0.0 1.1e-18 1.1e-18 20 151 .. 35 177 .. 17 180 .. 0.78
Alignments for each domain:
== domain 1 score: 53.4 bits; conditional E-value: 1.1e-18
PDH_N 20 deekakaalelglvdeatdd...ieavkeadivllavPvevilevlkel........aphlkedalitDvgsvKekvvkelekllkgksfvgghPma 105
++ + k+a+el+l de + + +k+ d++ll+ P+ il+++ +l + ++ l+ D+gs+K+++ k+ +l + +fvg+hPma
VIMSS6862625 35 SPATLKRARELELADEFFEYdetEKWAKDSDLILLCAPILHILKMIDALgkvswagaNAAADREILVSDIGSTKVEICKAGVRLPSPFRFVGSHPMA 131
566778888898887753311224568999***************998822222221124567899*************99998889********** PP
PDH_N 106 GteksGvdaareelfenavviLtPtektdkealelvkelleevgar 151
G+ek ++ fena + +P + t++ + + e+++ vga
VIMSS6862625 132 GSEKRTCEYNDPAIFENAYWFVCPPDGTPESVYAPLLEIIRFVGAN 177
****************************999999999998888875 PP
Or compare VIMSS6862625 to CDD or PaperBLAST