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Align VIMSS6872875 to PF02153 (PDH_N)

VIMSS6872875 has 359 amino acids

Query:       PDH_N  [M=154]
Accession:   PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    8.3e-22   63.5   0.0    1.8e-21   62.4   0.0    1.5  2  VIMSS6872875  


Domain annotation for each sequence (and alignments):
>> VIMSS6872875  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -3.5   0.0      0.36      0.36     114     147 ..      16      49 ..      14      51 .. 0.76
   2 !   62.4   0.0   1.8e-21   1.8e-21      41     153 ..     119     220 ..     108     221 .. 0.93

  Alignments for each domain:
  == domain 1  score: -3.5 bits;  conditional E-value: 0.36
         PDH_N 114 aareelfenavviLtPtektdkealelvkellee 147
                   ++   l+ +++  L  ++ +  e+l+ v+ ll++
  VIMSS6872875  16 QSLIALLSDRISLLASEQPSLDEQLASVAPLLAQ 49 
                   5666788888888888888888999999888876 PP

  == domain 2  score: 62.4 bits;  conditional E-value: 1.8e-21
         PDH_N  41 eavkeadivllavPvevilevlkelaphlkedalitDvgsvKekvvkelekllkgksfvgghPmaGteksGvdaareelfenavviLtPtektdkea 137
                   + +++a++vl++vP+e + +v+k  a+ l  +  ++D++s+K+++ +++ ++ +   + g hPm+G+        + ++f +++v+ +P  ++d   
  VIMSS6872875 119 QLLSQAELVLVSVPIEHTVDVIKRAAKYLASNTALCDITSIKTQPTQAMLEHHC-GPVMGLHPMFGP--------NIKSFLGQKVVVCPGRNDD--S 204
                   46899*************************************************.899*********........99**************776..8 PP

         PDH_N 138 lelvkelleevgarvi 153
                   ++ + ++l+  g+ +i
  VIMSS6872875 205 FQWLLDFLKSKGGELI 220
                   9999999999999876 PP



Or compare VIMSS6872875 to CDD or PaperBLAST