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Align VIMSS94932 to PF02153 (PDH_N)

VIMSS94932 has 373 amino acids

Query:       PDH_N  [M=154]
Accession:   PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    3.5e-17   48.5   0.0    1.8e-16   46.2   0.0    2.0  2  VIMSS94932  


Domain annotation for each sequence (and alignments):
>> VIMSS94932  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.9   0.0     0.059     0.059      44      66 ..      57      79 ..      46      82 .. 0.77
   2 !   46.2   0.0   1.8e-16   1.8e-16      40     137 ..     137     225 ..     124     240 .. 0.84

  Alignments for each domain:
  == domain 1  score: -0.9 bits;  conditional E-value: 0.059
       PDH_N 44 keadivllavPvevilevlkela 66
                + a+   l vP++ i++vl+ + 
  VIMSS94932 57 RRAEAEALGVPPDLIEDVLRRVM 79
                566666799**********9875 PP

  == domain 2  score: 46.2 bits;  conditional E-value: 1.8e-16
       PDH_N  40 ieavkeadivllavPvevilevlkelaphlkedalitDvgsvKekvvkelekllkgksfvgghPmaGteksGvdaareelfenavviLtPtek.tdkea 137
                  + v +a +v+++vP++v+++v+ +l p l +d++++D++svK+ + +++ +      + g hPm+G+           ++ ++vv+ ++  k +  ++
  VIMSS94932 137 ADIVADAGMVIVSVPIHVTEQVIGKLPP-LPKDCILVDLASVKNGPLQAMLAAHD-GPVLGLHPMFGP--------DSGSLAKQVVVWCDGRKpEAYQW 225
                 457999**********************.*********************99998.89**********........77788888888888887444444 PP



Or compare VIMSS94932 to CDD or PaperBLAST