PaperBLAST – Find papers about a protein or its homologs

 

Align WP_012723043.1 to PF02153 (PDH_N)

WP_012723043.1 has 290 amino acids

Query:       PDH_N  [M=154]
Accession:   PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    8.2e-09   21.3   0.0    1.2e-08   20.7   0.0    1.3  1  WP_012723043.1  


Domain annotation for each sequence (and alignments):
>> WP_012723043.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   20.7   0.0   1.2e-08   1.2e-08       2     108 ..      20     125 ..      19     144 .. 0.93

  Alignments for each domain:
  == domain 1  score: 20.7 bits;  conditional E-value: 1.2e-08
           PDH_N   2 aralrrkgfkvtvigydideekakaalelglvdeatddieavkeadivllavPvevilevlkelaphlkedalitDvgsvKekvvkelekllkgk 96 
                      r l+++g +v+v+ +   e++++   e+++    +d  +  ++a  v+ a P  v    +  ++  l+ +++++ + sv     k+l++  +++
  WP_012723043.1  20 SRILKQYGYFVRVVDRRPAEFECEYH-EMDVTKPFNDTGAVFRNATAVVFALPESVAVSAIPWVTTFLSSEVVLIPTCSVQGPFYKALKAAAPRQ 113
                     689********************999.999999999987889***************************************************** PP

           PDH_N  97 sfvgghPmaGte 108
                      fvg  Pm+ ++
  WP_012723043.1 114 PFVGVNPMFSPK 125
                     ********9884 PP



Or compare WP_012723043.1 to CDD or PaperBLAST