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Align biolip::3gggD to PF02153 (PDH_N)

biolip::3gggD has 293 amino acids

Query:       PDH_N  [M=154]
Accession:   PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-60  189.2   0.0    2.4e-60  188.7   0.0    1.2  1  biolip::3gggD  


Domain annotation for each sequence (and alignments):
>> biolip::3gggD  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  188.7   0.0   2.4e-60   2.4e-60       1     153 [.      28     181 ..      28     182 .. 0.99

  Alignments for each domain:
  == domain 1  score: 188.7 bits;  conditional E-value: 2.4e-60
          PDH_N   1 laralrrkgfkvtvigydideekakaalelglvdeatddieavkea..divllavPvevilevlkelaphlkedalitDvgsvKekvvkelekllk 94 
                    +a++lrr+gfk +++gydi++e++++a++lg++de t++i++v+++  d+v+l++Pv++++e++k+l+++l+eda++tD+gsvK k+v++le++l 
  biolip::3gggD  28 FAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFspDFVMLSSPVRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILG 123
                    79********************************************9************************************************* PP

          PDH_N  95 gksfvgghPmaGteksGvdaareelfenavviLtPtektdkealelvkelleevgarvi 153
                     k+fvgghP+aGteksGv+++ ++l+e+++viLtPt+ktdk++l+lvk+++e+vg++v+
  biolip::3gggD 124 -KRFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVE 181
                    .*******************************************************986 PP



Or compare biolip::3gggD to CDD or PaperBLAST