biolip::4wjiA has 293 amino acids
Query: PDH_N [M=154]
Accession: PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-43 133.9 0.0 2.4e-43 133.5 0.0 1.2 1 biolip::4wjiA
Domain annotation for each sequence (and alignments):
>> biolip::4wjiA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 133.5 0.0 2.4e-43 2.4e-43 1 151 [. 19 171 .. 19 174 .. 0.98
Alignments for each domain:
== domain 1 score: 133.5 bits; conditional E-value: 2.4e-43
PDH_N 1 laralrrkgfkvtvigydideekakaalelglvdeatdd.ieavkeadivllavPvevilevlkelaphlkedalitDvgsvKekvvkelekllk. 94
+ar++r+k t++ + ++e + k+a elgl+d t + eav+ ad+v+++vPv + v++e+a hlk++a++tDvgs+K +v+ ++ +l+
biolip::4wjiA 19 IARDIREKQLAGTIVVTTRSEATLKRAGELGLGDRYTLSaAEAVEGADLVVVSVPVGASGAVAAEIAAHLKPGAIVTDVGSTKGSVIAQMAPHLPk 114
79************************************999******************************************************* PP
PDH_N 95 gksfvgghPmaGteksGvdaareelfenavviLtPtektdkealelvkelleevgar 151
++fv+ghP+aGte+sG+da+++ lf ++ iLtP + td+ea++ ++ ++e +g
biolip::4wjiA 115 DVHFVPGHPIAGTEHSGPDAGFAGLFRGRWCILTPPAGTDEEAVARLRLFWETLGSM 171
****************************************************99976 PP
Or compare biolip::4wjiA to CDD or PaperBLAST