PaperBLAST – Find papers about a protein or its homologs

 

Align Q2A303 to PF02622 (DUF179)

Q2A303 has 194 amino acids

Query:       DUF179  [M=157]
Accession:   PF02622.19
Description: Uncharacterized ACR, COG1678
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    1.3e-46  144.7   0.0    1.4e-46  144.5   0.0    1.0  1  Q2A303    


Domain annotation for each sequence (and alignments):
>> Q2A303  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.5   0.0   1.4e-46   1.4e-46       5     157 .]      19     177 ..      14     177 .. 0.94

  Alignments for each domain:
  == domain 1  score: 144.5 bits;  conditional E-value: 1.4e-46
  DUF179   5 dpnFersVvllcehneegamGlvlNrpleltlkelleelleleaepaaee....pvylGGPveqdrlfvlhsle...lessleisdglyltgsldilealagg 100
             d  F +sVv+lc+++++gamGl++N+pl  tlk+++ee l+++++++ +e    p+y+GGP++++++++lh+++   ++s++++++gl++t+s dile++a++
  Q2A303  19 DIVFTKSVVYLCQNDRHGAMGLIINKPLADTLKDVFEE-LHIPHTNTFKEileyPLYMGGPISPHKIMILHTTNgrnYTSTIKLDEGLAITASIDILEDIANN 120
             556***********************************.7888777666469********************667789************************* PP

  DUF179 101 agpeklrvflGyagWgagQLeeEieenaWlvvpasdeellfetppeelWeealrrlG 157
               pe ++ ++Gy+ W+a+QL +Ei++n+W+v+++ ++++lf+++++ +W++ l++ G
  Q2A303 121 ILPEYFLPVVGYSCWTANQLTDEIKSNDWIVTNKLNKKILFNHENKVKWQNHLEHAG 177
             *****************************************************9987 PP



Or compare Q2A303 to CDD or PaperBLAST