PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS519157 to PF02622 (DUF179)

VIMSS519157 has 192 amino acids

Query:       DUF179  [M=157]
Accession:   PF02622.19
Description: Uncharacterized ACR, COG1678
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.5e-57  180.2   0.0    1.7e-57  180.0   0.0    1.0  1  VIMSS519157  


Domain annotation for each sequence (and alignments):
>> VIMSS519157  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  180.0   0.0   1.7e-57   1.7e-57       1     157 []      21     179 ..      21     179 .. 0.94

  Alignments for each domain:
  == domain 1  score: 180.0 bits;  conditional E-value: 1.7e-57
       DUF179   1 PsledpnFersVvllcehneegamGlvlNrpleltlkelleelleleaepaae.e.pvylGGPveqdrlfvlhsle..lessleisdglyltgsldil 94 
                  P++ dp F++s v+lceh e+gamGl++N+p+++ +++l+++  +l+ +++++ +  vy+GGPv++dr+fvlh+ +  ++ssl ++d+++lt+s+d+l
  VIMSS519157  21 PGMGDPLFAKSLVYLCEHGEHGAMGLIINKPSGIAMAQLFDQ-IDLPLDDEDTrTgLVYFGGPVQPDRGFVLHQPAgnWQSSLMVTDDIALTTSKDVL 117
                  89****************************************.6777776666447******************44568******************* PP

       DUF179  95 ealaggagpeklrvflGyagWgagQLeeEieenaWlvvpasdeellfetppeelWeealrrlG 157
                   a+++g++pe+l++ lGyagW+agQLe+Ei++n Wl+vpa +++++f+ p+ee++++a++ lG
  VIMSS519157 118 VAVSEGKKPEQLLISLGYAGWSAGQLEKEIADNGWLTVPA-EPSIVFDLPYEERYDAAMALLG 179
                  ****************************************.666****************998 PP



Or compare VIMSS519157 to CDD or PaperBLAST