PaperBLAST – Find papers about a protein or its homologs

 

Align WP_006343301.1 to PF02622 (DUF179)

WP_006343301.1 has 189 amino acids

Query:       DUF179  [M=157]
Accession:   PF02622.19
Description: Uncharacterized ACR, COG1678
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.3e-42  130.3   0.0    3.8e-42  130.1   0.0    1.0  1  WP_006343301.1  


Domain annotation for each sequence (and alignments):
>> WP_006343301.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  130.1   0.0   3.8e-42   3.8e-42       1     157 []      19     173 ..      19     173 .. 0.93

  Alignments for each domain:
  == domain 1  score: 130.1 bits;  conditional E-value: 3.8e-42
          DUF179   1 PsledpnFersVvllcehneegamGlvlNrpleltlkelleelleleaepaaeepvylGGPveqdrlfvlhsle..lessleisdglyltgsldi 93 
                     P+ ++  F+rsV+llceh+ +g++Gl+lN+ l+l++++ +  + ++++++ +    ++GGP++ +++++lhs++   e++lei + +yl+g+l+ 
  WP_006343301.1  19 PDTDQGVFARSVILLCEHSLNGSFGLILNKTLGLEIADDIFTVDKVSNNNIR---FCMGGPLQANQMMLLHSCSeiPEQTLEICPSVYLGGDLSF 110
                     5667889*****************************9999887888877666...*****************777889***************** PP

          DUF179  94 lealaggagpeklrvflGyagWgagQLeeEieenaWlvvpasdeellfetppeelWeealrrlG 157
                     l+++a++++   + +++Gy+gW+agQLe+E+ +++W+++pas e  +f++ pe+lW+ +l+ lG
  WP_006343301.1 111 LQEIASSETGPMINLCFGYSGWQAGQLEREFLDGNWFLAPASYE-YVFTDCPENLWSMILKDLG 173
                     ****99999999*****************************666.99999***********998 PP



Or compare WP_006343301.1 to CDD or PaperBLAST