VIMSS39059 has 164 amino acids
Query: DUF188 [M=130]
Accession: PF02639.18
Description: Uncharacterized BCR, YaiI/YqxD family COG1671
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-46 143.6 0.0 1.6e-46 143.4 0.0 1.1 1 VIMSS39059
Domain annotation for each sequence (and alignments):
>> VIMSS39059
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 143.4 0.0 1.6e-46 1.6e-46 1 129 [. 28 157 .. 28 158 .. 0.97
Alignments for each domain:
== domain 1 score: 143.4 bits; conditional E-value: 1.6e-46
DUF188 1 ivlrvaerlklevilvankslrlpss.elvelvvVdagadaaDdkIveraekgDlvvTqDipLAarvlekgakvlnprGelyteenIdellaeRdlmek 98
++l++a++++++v++va+++++ s+ + ++ +Vd +++aaD +I++++++gD+vvTqDi+LA+++l+++++v+++rG+ly+e++Id +l+ R+++ k
VIMSS39059 28 EILQTASEYEVQVLFVASFEHYQLSRsNEEKWKYVDPHKEAADLYIANHVKPGDIVVTQDIGLASLLLNRNVSVMSERGRLYKEDTIDFALEGRHFSGK 126
6899*****************98875599********************************************************************** PP
DUF188 99 lRragkktkgpkkfskedrsrFanaLdrlla 129
Rr+g+ kgpkk++kedr+rF + L+++l+
VIMSS39059 127 QRRKGVYAKGPKKLNKEDRERFITLLQKILS 157
****************************996 PP
Or compare VIMSS39059 to CDD or PaperBLAST