PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS6579164 to PF02656 (DUF202)

VIMSS6579164 has 122 amino acids

Query:       DUF202  [M=68]
Accession:   PF02656.19
Description: Domain of unknown function (DUF202)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    4.4e-21   61.5   2.4    4.4e-21   61.5   2.4    1.7  2  VIMSS6579164  


Domain annotation for each sequence (and alignments):
>> VIMSS6579164  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.5   2.4   4.4e-21   4.4e-21       1      67 [.      24      85 ..      24      86 .. 0.94
   2 ?   -1.1   0.2      0.15      0.15      19      27 ..     105     113 ..      98     120 .. 0.51

  Alignments for each domain:
  == domain 1  score: 61.5 bits;  conditional E-value: 4.4e-21
        DUF202  1 rdglAnERTfLaWlRtslalialgvallrffleggptalalilglilivlgiltlllalvrylrrer 67
                  ++++AnERTfL+Wl +++ l++l+v+ll+f   g++ +  +i + ++++++i t+++al  y++r++
  VIMSS6579164 24 KVFFANERTFLSWLSFAVVLGGLSVGLLNF---GDRIG--KISAGLFTIVAIGTMGYALGIYHWRAS 85
                  689**************************6...88777..************************987 PP

  == domain 2  score: -1.1 bits;  conditional E-value: 0.15
        DUF202  19 alialgval 27 
                    ++ l++ +
  VIMSS6579164 105 CFVLLAAII 113
                   333333333 PP



Or compare VIMSS6579164 to CDD or PaperBLAST