VIMSS34412 has 110 amino acids
Query: UPF0060 [M=107]
Accession: PF02694.19
Description: Uncharacterised BCR, YnfA/UPF0060 family
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.3e-53 164.1 9.4 6e-53 163.9 9.4 1.0 1 VIMSS34412
Domain annotation for each sequence (and alignments):
>> VIMSS34412
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 163.9 9.4 6e-53 6e-53 1 107 [] 2 109 .. 2 109 .. 0.99
Alignments for each domain:
== domain 1 score: 163.9 bits; conditional E-value: 6e-53
UPF0060 1 vlrsillfllaalaeigGaylvwlwlreaksvllalvaaillavygflatlqp.aafGrvyaayGGvfvvlallwglvvdgvkldlydwiGalialvGv 98
v+rsillf+laa+aeigGa+lvw+++re++++l+a +++i+l+vygf+atlqp a+fGrv+aayGGvfv+++l+wg+++dg+++d++d+iGal++++Gv
VIMSS34412 2 VVRSILLFVLAAVAEIGGAWLVWQGVREQRGWLWAGLGVIALGVYGFFATLQPdAHFGRVLAAYGGVFVAGSLAWGMALDGFRPDRWDVIGALGCMAGV 100
69************************************************************************************************* PP
UPF0060 99 lvilyaprg 107
+vi+yaprg
VIMSS34412 101 AVIMYAPRG 109
*******96 PP
Or compare VIMSS34412 to CDD or PaperBLAST