reanno::pseudo5_N2C3_1:AO356_03600 has 110 amino acids
Query: UPF0060 [M=107]
Accession: PF02694.19
Description: Uncharacterised BCR, YnfA/UPF0060 family
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3e-33 100.6 11.2 3.3e-33 100.4 11.2 1.0 1 reanno::pseudo5_N2C3_1:AO356_03600
Domain annotation for each sequence (and alignments):
>> reanno::pseudo5_N2C3_1:AO356_03600
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 100.4 11.2 3.3e-33 3.3e-33 5 106 .. 4 106 .. 1 107 [. 0.95
Alignments for each domain:
== domain 1 score: 100.4 bits; conditional E-value: 3.3e-33
UPF0060 5 illfllaalaeigGaylvwlwlreaksvllalvaaillavygflatlqp.aafGrvyaayGGvfvvlallwglvv 78
l+f+laal ei+G+y w+wlr++ks+++ +a ++l+++++l+t + Gr+yaayGG+++++++ w+ vv
reanno::pseudo5_N2C3_1:AO356_03600 4 YLWFFLAALFEIAGCYAFWMWLRQGKSAWWIAPALLSLTLFALLLTRIEaTYAGRAYAAYGGIYIIASIGWLAVV 78
699****************************************9996553788********************** PP
UPF0060 79 dgvkldlydwiGalialvGvlvilyapr 106
++v++ dwiG + +++G vil++pr
reanno::pseudo5_N2C3_1:AO356_03600 79 ERVRPLGSDWIGVALCVLGASVILFGPR 106
**************************98 PP
Or compare reanno::pseudo5_N2C3_1:AO356_03600 to CDD or PaperBLAST