PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS512376 to PF02696 (SelO)

VIMSS512376 has 487 amino acids

Query:       SelO  [M=465]
Accession:   PF02696.18
Description: Protein adenylyltransferase SelO
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
   6.3e-123  396.9   0.0   8.2e-123  396.5   0.0    1.1  1  VIMSS512376  


Domain annotation for each sequence (and alignments):
>> VIMSS512376  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  396.5   0.0  8.2e-123  8.2e-123       6     462 ..      10     455 ..       5     458 .. 0.91

  Alignments for each domain:
  == domain 1  score: 396.5 bits;  conditional E-value: 8.2e-123
         SelO   6 eyepaleslgedyydevaaaefpqkilrfrndalleelgldpeavkdedfieafgkf...qgiepllalrYhGyqFGeynpqLGDGRgflygqvrgkd 100
                    +++++ l  ++y++++ +     +l+++n + ++ +gldp++++ + f+++f+++    g  + la +Y+G+qFG +++qLG+ Rg          
  VIMSS512376  10 PTDNSFAALPAEFYTRLQPRPPAAPRLLHANAEAAALIGLDPAEFSTQAFLDVFSGHaplPGGDT-LAAVYSGHQFGVWAGQLGEVRGPA-------- 98 
                  556789999***********************************************966445555.5****************9877654........ PP

         SelO 101 gelydfgtKGsGrTPySRggDGrlvLkggvREvlasealhklgvrtsralslietgeklwRgdePsptrssvlvRlarshiRfGtferlkylkrldll 198
                  g   ++++KG+G+TPySR+gDGr+vL+++vRE+lasea+h lg++t+r+l+l+ ++++++R+   ++++++v+ R+a+s++RfG+fe++ +++++++l
  VIMSS512376  99 GG-WELQLKGAGMTPYSRMGDGRAVLRSSVREYLASEAMHGLGIPTTRSLALVVSDDPVMRE---TVETAAVVTRMAPSFVRFGSFEHWSARRQPEQL 192
                  33.589********************************************************...********************************* PP

         SelO 199 kkLldhvieeyypel........adeedkyalfyaelvervAelvAqWmaaGFchgVlNTDNmsitGesfDYGPyaFldtydpkftaayfDyagrYsy 288
                  + L+d+vi+ +ype+          e+ ++  + a + +r+A l+A W+a+GFchgV+NTDNmsi+G ++DYGPy+F+dt+++ ++++++D +grY++
  VIMSS512376 193 RVLADYVIDRFYPECrvagagrlDGEHGEILGLLAAVTRRTALLMADWQAVGFCHGVMNTDNMSILGLTLDYGPYGFMDTFQLGHICNHSDSEGRYAW 290
                  ***************88888776666689999****************************************************************** PP

         SelO 289 gnqpsicllNLealqeplaali.ekeeleaaleefkevyetkYrqlmlkkLGleelseeeaeelleetlelLketqvdYheffaeLaeefskkwrdda 385
                  ++qps+ l+NL +l+++l++l  + e+l a l+ ++ v++++++ +m+ kLGl +   +e e+ll+ +l+l++++ +d++  f++L e  + + +  +
  VIMSS512376 291 NRQPSVGLWNLYRLASSLHTLApDPEALRAVLDGYEAVFTQAFHGRMAGKLGLPQF-LPEDETLLDDLLQLMHQQGADFTLAFRRLGEAVRGQRQPFE 387
                  *********************847899**************************776.78999*************************99999887666 PP

         SelO 386 elileeseleleeealeewrelYkklleqleeeeleeiaerlkkvNpktvllrplieevieaiaeeddwqplkklle 462
                  +++       ++++a+ +w +    +  + +   ++++a+ +++vNp++vl++ l+e++i a a++ d  +++ ll+
  VIMSS512376 388 DSF-------IDRAAAGAWYDRLAARHAS-DGRAAQARAAAMDEVNPLYVLRNHLAEQAIRA-AARGDAGEIDILLK 455
                  665.......4566788998888777664.5668999***********************99.77777777766665 PP



Or compare VIMSS512376 to CDD or PaperBLAST