VIMSS293922 has 1247 amino acids
Query: Met_synt_B12 [M=273] Accession: PF02965.21 Description: Vitamin B12 dependent methionine synthase, activation domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.5e-133 429.7 0.1 3.9e-133 429.1 0.1 1.3 1 VIMSS293922 Domain annotation for each sequence (and alignments): >> VIMSS293922 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 429.1 0.1 3.9e-133 3.9e-133 2 273 .] 950 1222 .. 949 1222 .. 0.99 Alignments for each domain: == domain 1 score: 429.1 bits; conditional E-value: 3.9e-133 Met_synt_B12 2 leelveyidWtpffqaWelkgkypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpAnsegddievyadesrseelatlhtLrqq 96 le+lv++idWtpff+aWelkg+yp+ile+e++g++a++lf+dAq+++k+ii+ kl+++k+v+g+fpAns+ ddi vy+de+ s+ l+++htLrqq VIMSS293922 950 LETLVPFIDWTPFFTAWELKGRYPAILESETTGKQARELFADAQKLMKTIITGKLFRTKGVIGIFPANSVRDDIFVYEDENCSKLLTVFHTLRQQ 1044 899******************************************************************************************** PP Met_synt_B12 97 aeke.egkpnlclaDfvapkesgvkDyiGlFavtaglgieelakefeaekddYsailvkaladrLaeAfaellhekvrkelWgyakdeklsneel 190 +k+ e++pn+claD+vapkesg+ DyiG+Favtag+g+ee+akefe+++ddY++i++kal dr+aeAfae++h kvrke+Wgy k+e+ls e+l VIMSS293922 1045 IQKQdETEPNYCLADYVAPKESGRVDYIGGFAVTAGHGVEEFAKEFENNQDDYNSIMAKALGDRFAEAFAEYMHYKVRKEYWGYDKNENLSPEDL 1139 99887899*************************************************************************************** PP Met_synt_B12 191 ikekYqgiRpApGYpacpdhtekktlfelldaeekigieLteslamtPaasvsGlyfahpearyFavgkiekdqvedyakrkg 273 i+ekY+giRpA+GYpa pdhtek+ lf+ll++e+++gi+Lte++am+Pa+svsGlyfahp+++yFav+ki++dqvedyakrk+ VIMSS293922 1140 IREKYRGIRPAAGYPASPDHTEKRALFDLLQVEKNTGITLTEHFAMWPASSVSGLYFAHPKSKYFAVAKINRDQVEDYAKRKE 1222 *********************************************************************************95 PP
Or compare VIMSS293922 to CDD or PaperBLAST