VIMSS1238803 has 739 amino acids
Query: DUF262 [M=221]
Accession: PF03235.14
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-32 99.4 0.4 1.8e-32 99.4 0.4 2.1 2 VIMSS1238803
Domain annotation for each sequence (and alignments):
>> VIMSS1238803
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 99.4 0.4 1.8e-32 1.8e-32 2 220 .. 51 264 .. 50 265 .. 0.78
2 ? -1.6 0.6 0.14 0.14 158 172 .. 428 447 .. 357 526 .. 0.60
Alignments for each domain:
== domain 1 score: 99.4 bits; conditional E-value: 1.8e-32
DUF262 2 edllskskrglriPdfQRpyvWeeeqveeLiedlla......lkgyplGsivlw...skaads...ageleviDGQQRltTltlllaa...t..kee 81
d+l++s++ ++i ++QR y+W+e+q+++L++d+ + + +++Gs+v + + l+vi GQQRltT +ll++a + ++e
VIMSS1238803 51 LDFLKRSQQ-FVITIYQRTYSWTEQQCRQLWDDIIRagkrddISAHFIGSVVYIeqgL-Y--QvsgISPLLVIEGQQRLTTAMLLIEAlsrHlgEDE 143
578888888.*************************9*****99**********86642.2..2346999*******************332133222 PP
DUF262 82 sekriknleaeiek.............ekeeededrlkrreresdkellqkllrseklsleekeelaelnsltkkdlakeekrneeknlikayevie 165
+ + +e+ e+ +k+ +e+dk+ l l++++ +n+ +++++++ +++
VIMSS1238803 144 VF-----------DgfsamklrnyyllNPYESGEKGFKLLLTETDKDSLLALIKQRPMP-----------------------ENYSHRIMENFTFFD 206
22...........1322333333335666677777777777777777777777777765.......................8999*********** PP
DUF262 166 eilksa......llsalktklslieieleseddedqayeiFerlNsrGvpLtasellkall 220
e++ + l + l kl ++ + l + +d + iFe++Ns+G++L++++l+++++
VIMSS1238803 207 EQITKLgddlipLCRGL-AKLLIVDVALNRG--QDNPQLIFESMNSTGKALSQADLVRNFI 264
99888898877733333.6667999999965..559***********************87 PP
== domain 2 score: -1.6 bits; conditional E-value: 0.14
DUF262 158 ikayevieeilksa.......l 172
y+vi+++ k + +
VIMSS1238803 428 ATFYKVINKE-K-YlesiqvhF 447
3333333331.1.012222220 PP
Or compare VIMSS1238803 to CDD or PaperBLAST