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Align VIMSS1238803 to PF03235 (DUF262)

VIMSS1238803 has 739 amino acids

Query:       DUF262  [M=221]
Accession:   PF03235.14
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.8e-32   99.4   0.4    1.8e-32   99.4   0.4    2.1  2  VIMSS1238803  


Domain annotation for each sequence (and alignments):
>> VIMSS1238803  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   99.4   0.4   1.8e-32   1.8e-32       2     220 ..      51     264 ..      50     265 .. 0.78
   2 ?   -1.6   0.6      0.14      0.14     158     172 ..     428     447 ..     357     526 .. 0.60

  Alignments for each domain:
  == domain 1  score: 99.4 bits;  conditional E-value: 1.8e-32
        DUF262   2 edllskskrglriPdfQRpyvWeeeqveeLiedlla......lkgyplGsivlw...skaads...ageleviDGQQRltTltlllaa...t..kee 81 
                    d+l++s++ ++i ++QR y+W+e+q+++L++d+ +       + +++Gs+v          +    + l+vi GQQRltT +ll++a   +  ++e
  VIMSS1238803  51 LDFLKRSQQ-FVITIYQRTYSWTEQQCRQLWDDIIRagkrddISAHFIGSVVYIeqgL-Y--QvsgISPLLVIEGQQRLTTAMLLIEAlsrHlgEDE 143
                   578888888.*************************9*****99**********86642.2..2346999*******************332133222 PP

        DUF262  82 sekriknleaeiek.............ekeeededrlkrreresdkellqkllrseklsleekeelaelnsltkkdlakeekrneeknlikayevie 165
                                +             + +e+ e+ +k+  +e+dk+ l  l++++                          +n+ +++++++ +++
  VIMSS1238803 144 VF-----------DgfsamklrnyyllNPYESGEKGFKLLLTETDKDSLLALIKQRPMP-----------------------ENYSHRIMENFTFFD 206
                   22...........1322333333335666677777777777777777777777777765.......................8999*********** PP

        DUF262 166 eilksa......llsalktklslieieleseddedqayeiFerlNsrGvpLtasellkall 220
                   e++ +       l + l  kl ++ + l +   +d  + iFe++Ns+G++L++++l+++++
  VIMSS1238803 207 EQITKLgddlipLCRGL-AKLLIVDVALNRG--QDNPQLIFESMNSTGKALSQADLVRNFI 264
                   99888898877733333.6667999999965..559***********************87 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.14
        DUF262 158 ikayevieeilksa.......l 172
                      y+vi+++ k +       +
  VIMSS1238803 428 ATFYKVINKE-K-YlesiqvhF 447
                   3333333331.1.012222220 PP



Or compare VIMSS1238803 to CDD or PaperBLAST