VIMSS143272 has 571 amino acids
Query: DUF262 [M=221]
Accession: PF03235.17
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.7e-42 129.7 0.3 9.7e-42 129.7 0.3 2.6 3 VIMSS143272
Domain annotation for each sequence (and alignments):
>> VIMSS143272
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 129.7 0.3 9.7e-42 9.7e-42 3 220 .. 13 242 .. 11 243 .. 0.70
2 ? 0.6 0.2 0.029 0.029 109 145 .. 304 334 .. 251 422 .. 0.56
3 ? -1.6 0.3 0.14 0.14 133 163 .. 526 557 .. 444 569 .. 0.51
Alignments for each domain:
== domain 1 score: 129.7 bits; conditional E-value: 9.7e-42
DUF262 3 dllskskrg...lriPdfQRpyvWeeeqieeLiedlla........lrgyplGsivlwskaadsageleviDGQQRltTltlllaa.......t..ke 80
+ll +++ + ++iP++QRpy+W++e++ L++d+++ +++y+lG+iv+ +++g+leviDGQQRlt+l lll+a t
VIMSS143272 13 NLLGNQDMQekyFIIPEYQRPYRWDTEKCAVLWSDIVDfrqsstgkNEEYFLGTIVV---CPNEKGNLEVIDGQQRLTSLLLLLRAfyrvleqTesTP 107
5677777777878********************************************...34559*********************766554414555 PP
DUF262 81 esekriknleaeiek..........ekeeededrlkrr.eresdkellqklirseklsleekeelselnsltkkdlakeekrneeknlikayevikei 167
+++i +l+ +i + e ++ +rl + +e+d+e l++++ + + s ++ ++n+ +y ++ ++
VIMSS143272 108 DTAAKITTLKSKIAPciwdvdvltaEITDRTAIRLHTQvATETDNEILHEILANGEIS-----------------------EECRSNYAVNYLYFLKQ 182
5555666666666656555553433222222222222223444444444444444444.......................55566666666666666 PP
DUF262 168 lksa..........llsalkeklslieielededdedqayeiFerlNsrGvpLtasellkall 220
++++ l+ ++ +++ l+ ie ++ ++ a +iF +lN+rG+pL++++++ka+l
VIMSS143272 183 CQEYartnpmdwyhLCLTILNDCILLPIESDSLNS---ALTIFSTLNDRGLPLSDADIFKARL 242
66666666666566555566777777777777666...***********************97 PP
== domain 2 score: 0.6 bits; conditional E-value: 0.029
DUF262 109 eresdkellqklirseklsleekeelselnsltkkdl 145
++ ++++l+++li+ ++ + + ns+t++d+
VIMSS143272 304 KQLENENLFNHLIELAGFWQDIN------NSKTNQDV 334
12233333333333333333221......22222222 PP
== domain 3 score: -1.6 bits; conditional E-value: 0.14
DUF262 133 elselnsltkkdl.akeekrneeknlikayev 163
e el + + +d +++ ++++++ + ++ ++
VIMSS143272 526 EVRELAGENANDWlPSDIQKRQQQIVDRLKQF 557
11122222222222333333333333333333 PP
Or compare VIMSS143272 to CDD or PaperBLAST