VIMSS156538 has 553 amino acids
Query: DUF262 [M=221]
Accession: PF03235.17
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.7e-40 124.2 9.3 4.7e-40 124.2 9.3 2.9 2 VIMSS156538
Domain annotation for each sequence (and alignments):
>> VIMSS156538
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 124.2 9.3 4.7e-40 4.7e-40 11 221 .] 17 239 .. 3 239 .. 0.79
2 ? -6.1 8.6 1 1 99 115 .. 387 403 .. 244 534 .. 0.64
Alignments for each domain:
== domain 1 score: 124.2 bits; conditional E-value: 4.7e-40
DUF262 11 g..lriPdfQRpyvWeeeqieeLiedlla.....lrgyplGsivlwskaadsageleviDGQQRltTltlllaatkeesekriknleaeiekekeeed 101
+ ++iP++QR+y+Wee + e+L+ dl + +++++G iv+ ++++++ +++iDGQQR++T +++laa +e + ++a ++ +++++
VIMSS156538 17 EniYKIPNYQREYSWEETELEDLWMDLSQiingeTESHFFGQIVI--HVDKKEKAKLIIDGQQRTSTAVIFLAA---MRELFTEMYNAGWDDAQFDAQ 109
1349***********************99*****9**********..677889*********************...233333333333333444444 PP
DUF262 102 edrlkrreresdkellqklirseklsleekeelselnsltkkdlakeekrneeknlikayevikeilksa................llsalkeklsli 183
+ +k+ r++++ + +kli +e+++ +++++s + ++l ++ ++++k+++ ay++++++l+++ ++s++ ek+s++
VIMSS156538 110 DITTKFIGRYTQTRDERKLILGENDKSY---FSNRIQSVSSEQLGLQKATKSQKRINFAYNYFYKKLEEEinssdfledkygllktFFSTFTEKCSVM 204
4444445444444444444444444333...245666777777877888999*************99999**99999999999999999999****** PP
DUF262 184 eielededdedqayeiFerlNsrGvpLtasellkalll 221
++e++d ++ a++iFe+lN+rG+ L++++llk++l+
VIMSS156538 205 FVETDDFNE---AFIIFETLNARGKDLETADLLKNHLF 239
****99988...***********************997 PP
== domain 2 score: -6.1 bits; conditional E-value: 1
DUF262 99 eededrlkrreresdke 115
e++ +++ +++ ++ e
VIMSS156538 387 ETEFSKIAFKIYQEEVE 403
22222222222222222 PP
Or compare VIMSS156538 to CDD or PaperBLAST