VIMSS156538 has 553 amino acids
Query: DUF262 [M=221]
Accession: PF03235.14
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.2e-40 124.1 9.3 5.2e-40 124.1 9.3 2.9 3 VIMSS156538
Domain annotation for each sequence (and alignments):
>> VIMSS156538
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 124.1 9.3 5.2e-40 5.2e-40 11 221 .] 17 239 .. 3 239 .. 0.79
2 ? -1.1 0.2 0.1 0.1 131 166 .. 271 305 .. 245 367 .. 0.55
3 ? -2.6 4.2 0.27 0.27 109 187 .. 397 440 .. 341 543 .. 0.56
Alignments for each domain:
== domain 1 score: 124.1 bits; conditional E-value: 5.2e-40
DUF262 11 g..lriPdfQRpyvWeeeqveeLiedlla.....lkgyplGsivlwskaadsageleviDGQQRltTltlllaa..t..keesekriknleaeiekek 97
+ ++iP++QR+y+Wee + e+L+ dl + +++++G iv+ ++++++ +++iDGQQR++T +++laa + e +++ +++ +
VIMSS156538 17 EniYKIPNYQREYSWEETELEDLWMDLSQiingeTESHFFGQIVI--HVDKKEKAKLIIDGQQRTSTAVIFLAAmrElfTEMYNAGWDD-------AQ 105
1349***********************99****99**********..677789*********************321233333333333.......44 PP
DUF262 98 eeededrlkrreresdkellqkllrseklsleekeelaelnsltkkdlakeekrneeknlikayevieeilksa................llsalktk 179
++++ + +k+ r++++ + +kl+ +e+++ +++++s + ++l ++ ++++k+++ ay++++++l+++ ++s++ +k
VIMSS156538 106 FDAQDITTKFIGRYTQTRDERKLILGENDKSY---FSNRIQSVSSEQLGLQKATKSQKRINFAYNYFYKKLEEEinssdfledkygllktFFSTFTEK 200
44444444444444444444444444444332...34566677777777788899999***********999999*99999999999999999999** PP
DUF262 180 lslieieleseddedqayeiFerlNsrGvpLtasellkalll 221
+s++++e+++ ++ a++iFe+lN+rG+ L++++llk++l+
VIMSS156538 201 CSVMFVETDDFNE---AFIIFETLNARGKDLETADLLKNHLF 239
********99888...***********************997 PP
== domain 2 score: -1.1 bits; conditional E-value: 0.1
DUF262 131 keelaelnsltkkdlakeekrneeknlikayeviee 166
+++++ ++kdl +e r++ + ++a+ +i++
VIMSS156538 271 HFWNSQNVFIREKDL-YKEIRKKITTQFEAIIFIDD 305
444444444444444.33345555555666666655 PP
== domain 3 score: -2.6 bits; conditional E-value: 0.27
DUF262 109 eresdkellqkllrseklsleekeelaelnsltkkdlakeekrneeknlikayevieeilksa.....llsalktklslieiel 187
+ + +e +++ +++++i++ + + ++s++kt+ +l ++
VIMSS156538 397 IYQ----------------------------------------EEVESVTEIINLIRTNIIADdvflnNFSSFKTTNKLRLRYI 440
222........................................22222223333333222222332222222222222211111 PP
Or compare VIMSS156538 to CDD or PaperBLAST