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Align VIMSS163622 to PF03235 (DUF262)

VIMSS163622 has 599 amino acids

Query:       DUF262  [M=221]
Accession:   PF03235.17
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
      4e-23   68.9   2.7    1.8e-22   66.7   0.8    2.9  2  VIMSS163622  


Domain annotation for each sequence (and alignments):
>> VIMSS163622  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   66.7   0.8   1.8e-22   1.8e-22      14     218 ..      25     178 ..      10     181 .. 0.64
   2 ?   -0.5   0.0     0.065     0.065     145     188 ..     502     562 ..     422     591 .. 0.67

  Alignments for each domain:
  == domain 1  score: 66.7 bits;  conditional E-value: 1.8e-22
       DUF262  14 iPdfQRpyvWeeeqieeLiedllalrgyplGsivlwskaads.ageleviDGQQRltTltlllaatkeesekriknleaeiekekeeededrlkrrer 110
                    ++QR+ vW+  + e+Li ++  l+gyp++ i+l ++ +   +g++e+iDG QRl +++ ++++                   +++ d ++++    
  VIMSS163622  25 NRKYQRKLVWTVLEKEKLIGSI--LKGYPIPLILLAERPQIHgSGKYEIIDGMQRLNAIFSYIEN-------------------SFSFDIQYFD---- 97 
                  558*******************..***********74444447**********************...................2222222222.... PP

       DUF262 111 esdkellqklirseklsleekeelselnsltkkdlakeekrneeknlikayevikeilksallsalkeklslieielededdedqayeiFerlNsrGv 208
                    d+  + k + +++  ++                     +n+++n ++ ++++     ++ ++ l+++l +++++    + e+++ e+F r+Ns G+
  VIMSS163622  98 -IDEFSYAKQLANDGIIEII--------------------SNNKDNEKQQLKLLSG---KECADILDYQLAVTVYTA---MAEEDITEVFGRINSSGK 168
                  .2233333333333333222....................2222222222222222...112233434444444444...45566************* PP

       DUF262 209 pLtasellka 218
                   L+++e + a
  VIMSS163622 169 HLSSQEKRQA 178
                  ******9876 PP

  == domain 2  score: -0.5 bits;  conditional E-value: 0.065
       DUF262 145 l....akeekrneeknlikayevikeilksa............llsal.keklslieiele 188
                        ++e r +++++ +  +v+++ + +              ++++ ++ +s+i+i++ 
  VIMSS163622 502 RyvvgIDREARLQNQTVEQYVRVLTNVIHNSsltdplktqiltKFDTIsYKGFSVIRITIP 562
                  2444445555666666666666666655555666677777666444444677788877776 PP



Or compare VIMSS163622 to CDD or PaperBLAST