VIMSS163622 has 599 amino acids
Query: DUF262 [M=221]
Accession: PF03235.17
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4e-23 68.9 2.7 1.8e-22 66.7 0.8 2.9 2 VIMSS163622
Domain annotation for each sequence (and alignments):
>> VIMSS163622
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 66.7 0.8 1.8e-22 1.8e-22 14 218 .. 25 178 .. 10 181 .. 0.64
2 ? -0.5 0.0 0.065 0.065 145 188 .. 502 562 .. 422 591 .. 0.67
Alignments for each domain:
== domain 1 score: 66.7 bits; conditional E-value: 1.8e-22
DUF262 14 iPdfQRpyvWeeeqieeLiedllalrgyplGsivlwskaads.ageleviDGQQRltTltlllaatkeesekriknleaeiekekeeededrlkrrer 110
++QR+ vW+ + e+Li ++ l+gyp++ i+l ++ + +g++e+iDG QRl +++ ++++ +++ d ++++
VIMSS163622 25 NRKYQRKLVWTVLEKEKLIGSI--LKGYPIPLILLAERPQIHgSGKYEIIDGMQRLNAIFSYIEN-------------------SFSFDIQYFD---- 97
558*******************..***********74444447**********************...................2222222222.... PP
DUF262 111 esdkellqklirseklsleekeelselnsltkkdlakeekrneeknlikayevikeilksallsalkeklslieielededdedqayeiFerlNsrGv 208
d+ + k + +++ ++ +n+++n ++ ++++ ++ ++ l+++l +++++ + e+++ e+F r+Ns G+
VIMSS163622 98 -IDEFSYAKQLANDGIIEII--------------------SNNKDNEKQQLKLLSG---KECADILDYQLAVTVYTA---MAEEDITEVFGRINSSGK 168
.2233333333333333222....................2222222222222222...112233434444444444...45566************* PP
DUF262 209 pLtasellka 218
L+++e + a
VIMSS163622 169 HLSSQEKRQA 178
******9876 PP
== domain 2 score: -0.5 bits; conditional E-value: 0.065
DUF262 145 l....akeekrneeknlikayevikeilksa............llsal.keklslieiele 188
++e r +++++ + +v+++ + + ++++ ++ +s+i+i++
VIMSS163622 502 RyvvgIDREARLQNQTVEQYVRVLTNVIHNSsltdplktqiltKFDTIsYKGFSVIRITIP 562
2444445555666666666666666655555666677777666444444677788877776 PP
Or compare VIMSS163622 to CDD or PaperBLAST