VIMSS1878 has 584 amino acids
Query: DUF262 [M=221] Accession: PF03235.17 Description: Protein of unknown function DUF262 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.7e-37 114.7 0.1 9.2e-37 113.4 0.0 1.7 2 VIMSS1878 Domain annotation for each sequence (and alignments): >> VIMSS1878 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 113.4 0.0 9.2e-37 9.2e-37 2 217 .. 14 226 .. 13 230 .. 0.74 2 ? -2.5 0.0 0.27 0.27 121 166 .. 296 341 .. 285 367 .. 0.59 Alignments for each domain: == domain 1 score: 113.4 bits; conditional E-value: 9.2e-37 DUF262 2 edllskskrg.lriPdfQRpyvWeeeqieeLiedllalrgyplGsivlw............skaadsageleviDGQQRltTltlllaatkeesekrikn 88 + ll+++++g + +Pd+QRp+vW++ ++++L++++ +rgyp+G++++w +++ ++l+v+DGQQRlt+l+ ++++ +k++ + VIMSS1878 14 GGLLENIDSGeIGLPDIQRPFVWDTTRVRDLFDSM--YRGYPIGTLLFWengfpgehrtigTGPKKKVPRLLVVDGQQRLTALYSVMKG-VPIVDKNFRQ 110 5789999999999**********************..********************9997555666**********************.3333333333 PP DUF262 89 leaeiek.ekeeededrlkrreresdkellqklirseklsleekeelselnsltkkdlakeekrneeknlikayevikeilksallsalkeklslieiel 187 i ++ee+ e ++ er+ + +++ +e+++l + ++++ ++ +++ l++ee r+ ++ i++++ + + + ++ +e+ VIMSS1878 111 RRLRIAFnPLEEKFEVTNTSIERDPTWISDISILWQEGFALYDFISSFMKRLEERRGLTEEE-RQRIPRSIQKLVNLVN-------------YPMTALEI 196 33333333222222222233455566667777777777777775555555555556665544.4444444444444444.............68999999 PP DUF262 188 ededdedqayeiFerlNsrGvpLtasellk 217 + +++e+q+ eiF r+NsrG+ L++++ + VIMSS1878 197 SASATEEQVSEIFVRINSRGRTLNQADFIL 226 999************************875 PP == domain 2 score: -2.5 bits; conditional E-value: 0.27 DUF262 121 irseklsleekeelselnsltkkdlakeekrneeknlikayevike 166 +++ ++s+e ++e++++ ++ +k++ + +++ ++ik +i++ VIMSS1878 296 LQTGEFSPERRDEQFDRLEKAQKEVLNLQNWHDFLKVIKRAGYIHH 341 4555555555555555555555555555555555555555555544 PP
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