VIMSS1878 has 584 amino acids
Query: DUF262 [M=221] Accession: PF03235.14 Description: Protein of unknown function DUF262 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.8e-37 115.2 0.1 6.7e-37 113.9 0.0 1.7 2 VIMSS1878 Domain annotation for each sequence (and alignments): >> VIMSS1878 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 113.9 0.0 6.7e-37 6.7e-37 2 217 .. 14 226 .. 13 230 .. 0.74 2 ? -2.7 0.0 0.3 0.3 122 165 .. 297 340 .. 285 365 .. 0.57 Alignments for each domain: == domain 1 score: 113.9 bits; conditional E-value: 6.7e-37 DUF262 2 edllskskrg.lriPdfQRpyvWeeeqveeLiedllalkgyplGsivlw............skaadsageleviDGQQRltTltlllaatkeesekrikn 88 + ll+++++g + +Pd+QRp+vW++ +v++L++++ ++gyp+G++++w +++ ++l+v+DGQQRlt+l+ ++++ +k++ + VIMSS1878 14 GGLLENIDSGeIGLPDIQRPFVWDTTRVRDLFDSM--YRGYPIGTLLFWengfpgehrtigTGPKKKVPRLLVVDGQQRLTALYSVMKG-VPIVDKNFRQ 110 5789999999999**********************..********************9997555566**********************.3333344443 PP DUF262 89 leaeiek....ekeeededrlkrreresdkellqkllrseklsleekeelaelnsltkkdlakeekrneeknlikayevieeilksallsalktklslie 184 i ek+e + ++ er+ + ++l +e+++l + ++++ ++ +++ l++ee+ + ++++k+ ++ + + ++ VIMSS1878 111 RRLRIAFnpleEKFEVTN---TSIERDPTWISDISILWQEGFALYDFISSFMKRLEERRGLTEEERQRIPRSIQKLVNLVN--------------YPMTA 193 333333332212222222...334555677777778888888877766665555666666655554444444444444443..............68999 PP DUF262 185 ieleseddedqayeiFerlNsrGvpLtasellk 217 +e++ +++e+q+ eiF r+NsrG+ L++++ + VIMSS1878 194 LEISASATEEQVSEIFVRINSRGRTLNQADFIL 226 999999************************875 PP == domain 2 score: -2.7 bits; conditional E-value: 0.3 DUF262 122 rseklsleekeelaelnsltkkdlakeekrneeknlikayevie 165 ++ ++s+e ++e++++ ++ +k++ + +++ ++ik +i+ VIMSS1878 297 QTGEFSPERRDEQFDRLEKAQKEVLNLQNWHDFLKVIKRAGYIH 340 44455555555555555555555544444444444444444444 PP
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