VIMSS1878 has 584 amino acids
Query: DUF262 [M=221]
Accession: PF03235.17
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.7e-37 114.7 0.1 9.2e-37 113.4 0.0 1.7 2 VIMSS1878
Domain annotation for each sequence (and alignments):
>> VIMSS1878
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 113.4 0.0 9.2e-37 9.2e-37 2 217 .. 14 226 .. 13 230 .. 0.74
2 ? -2.5 0.0 0.27 0.27 121 166 .. 296 341 .. 285 367 .. 0.59
Alignments for each domain:
== domain 1 score: 113.4 bits; conditional E-value: 9.2e-37
DUF262 2 edllskskrg.lriPdfQRpyvWeeeqieeLiedllalrgyplGsivlw............skaadsageleviDGQQRltTltlllaatkeesekrikn 88
+ ll+++++g + +Pd+QRp+vW++ ++++L++++ +rgyp+G++++w +++ ++l+v+DGQQRlt+l+ ++++ +k++ +
VIMSS1878 14 GGLLENIDSGeIGLPDIQRPFVWDTTRVRDLFDSM--YRGYPIGTLLFWengfpgehrtigTGPKKKVPRLLVVDGQQRLTALYSVMKG-VPIVDKNFRQ 110
5789999999999**********************..********************9997555666**********************.3333333333 PP
DUF262 89 leaeiek.ekeeededrlkrreresdkellqklirseklsleekeelselnsltkkdlakeekrneeknlikayevikeilksallsalkeklslieiel 187
i ++ee+ e ++ er+ + +++ +e+++l + ++++ ++ +++ l++ee r+ ++ i++++ + + + ++ +e+
VIMSS1878 111 RRLRIAFnPLEEKFEVTNTSIERDPTWISDISILWQEGFALYDFISSFMKRLEERRGLTEEE-RQRIPRSIQKLVNLVN-------------YPMTALEI 196
33333333222222222233455566667777777777777775555555555556665544.4444444444444444.............68999999 PP
DUF262 188 ededdedqayeiFerlNsrGvpLtasellk 217
+ +++e+q+ eiF r+NsrG+ L++++ +
VIMSS1878 197 SASATEEQVSEIFVRINSRGRTLNQADFIL 226
999************************875 PP
== domain 2 score: -2.5 bits; conditional E-value: 0.27
DUF262 121 irseklsleekeelselnsltkkdlakeekrneeknlikayevike 166
+++ ++s+e ++e++++ ++ +k++ + +++ ++ik +i++
VIMSS1878 296 LQTGEFSPERRDEQFDRLEKAQKEVLNLQNWHDFLKVIKRAGYIHH 341
4555555555555555555555555555555555555555555544 PP
Or compare VIMSS1878 to CDD or PaperBLAST