VIMSS18932 has 658 amino acids
Query: DUF262 [M=221]
Accession: PF03235.14
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-26 80.2 5.1 1.3e-26 80.2 5.1 4.2 4 VIMSS18932
Domain annotation for each sequence (and alignments):
>> VIMSS18932
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 80.2 5.1 1.3e-26 1.3e-26 39 220 .. 2 172 .. 1 173 [. 0.76
2 ? -8.5 12.7 1 1 109 161 .. 195 270 .. 174 456 .. 0.63
3 ? -8.0 11.5 1 1 145 166 .. 490 531 .. 371 552 .. 0.53
4 ? -0.6 10.8 0.069 0.069 115 204 .. 515 599 .. 467 612 .. 0.51
Alignments for each domain:
== domain 1 score: 80.2 bits; conditional E-value: 1.3e-26
DUF262 39 kgyplGsivlw.skaadsageleviDGQQRltTltlllaatkeesekriknleaeiekekeeededrlkrreresdkellqkllrseklsleekeelae 136
+g+++Gsi+ + + ++ s+++l++iDGQQRltT+tlll a + + +++ ++ +ek++ +e+e++l + ++ dk++ l +s+k++l++++ +++
VIMSS18932 2 NGHFIGSILYVlDSNTHSNNTLLIIDGQQRLTTITLLLIA----LRNHLSEEVEILEKFSRKEIESYLINSNKDGDKKFRLILSESDKDTLLSLIDKNK 96
69********97767777**********************....5566666666666677777777777777777777777777888777777544444 PP
DUF262 137 lnsltkkdlakeekrneeknlikayevieeilksa..llsalk...tklslieieleseddedqayeiFerlNsrGvpLtasellkall 220
++ ++ ++ +++e++e++++++ l++++ +kl ++ i+l+ + +d+ + iFe++Ns+ +Lt+ +l+++++
VIMSS18932 97 RKP-----------SEPSVKIVENFELFEKWISENtdKLETIFkglKKLMIVWISLD--KGKDDPQLIFESMNSKDIELTQTDLIRNYI 172
433...........6777778888888888888777733333223477788888888..56679***********************87 PP
== domain 2 score: -8.5 bits; conditional E-value: 1
DUF262 109 eresdkellqkllrseklsleekeelaelnsltkkdl.......................akeekrneeknlikay 161
++e+++ l+++++r++ + ++ k++++++ +kd+ + k++ +k l+ka+
VIMSS18932 195 RFEQNETLFNRFVRHYLTIKIGKIPNEKRVYEAFKDYrqkkgieiedllkdlqkycgyfcQIAFKKEDDKDLNKAL 270
3344444444445544444444444444444444444222222222223333333333333333333333333333 PP
== domain 3 score: -8.0 bits; conditional E-value: 1
DUF262 145 l....................akeekrneeknlikayeviee 166
l k +k+++ek+ ++ y++ +e
VIMSS18932 490 LadwalkiwtypileaetleeYKPKKEKKEKKEKEEYKLKKE 531
122222222222223333333222222222222222222222 PP
== domain 4 score: -0.6 bits; conditional E-value: 0.069
DUF262 115 ellqkllrseklsleekeelaelnsltkkdlakeekrneeknlikayevieeilksallsalktklslieieleseddedqayeiFerlN 204
+ +++ ++e+ +l+++++ ++l+s++++ ++e ++ ++++++++ e i+e+++++ + +++++i++ ++ +++ +++ ++N
VIMSS18932 515 KEKKEKKEKEEYKLKKEKKVYDLSSYKFSSDSRELFDILREKIKALDERITEKFNQK---Y--IAYKFCKISFVDIVVQEKGLKLYLKMN 599
111222222222222233344444444444444444444444444444444443332...2..466677777777777777888888887 PP
Or compare VIMSS18932 to CDD or PaperBLAST