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Align VIMSS18932 to PF03235 (DUF262)

VIMSS18932 has 658 amino acids

Query:       DUF262  [M=221]
Accession:   PF03235.17
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    1.2e-26   80.4   5.1    1.2e-26   80.4   5.1    4.2  2  VIMSS18932  


Domain annotation for each sequence (and alignments):
>> VIMSS18932  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   80.4   5.1   1.2e-26   1.2e-26      39     220 ..       2     172 ..       1     173 [. 0.78
   2 ?  -20.8  32.3         1         1     108     204 ..     514     599 ..     174     612 .. 0.79

  Alignments for each domain:
  == domain 1  score: 80.4 bits;  conditional E-value: 1.2e-26
      DUF262  39 rgyplGsivlw.skaadsageleviDGQQRltTltlllaatkeesekriknleaeiekekeeededrlkrreresdkellqklirseklsleekeelse 136
                  g+++Gsi+ + + ++ s+++l++iDGQQRltT+tlll a    + + +++ ++ +ek++ +e+e++l  + ++ dk++   l +s+k++l++++ +++
  VIMSS18932   2 NGHFIGSILYVlDSNTHSNNTLLIIDGQQRLTTITLLLIA----LRNHLSEEVEILEKFSRKEIESYLINSNKDGDKKFRLILSESDKDTLLSLIDKNK 96 
                 69********97777777**********************....6666666666666677788888888888888888888888888888888554444 PP

      DUF262 137 lnsltkkdlakeekrneeknlikayevikeilksa..llsalk...eklslieielededdedqayeiFerlNsrGvpLtasellkall 220
                 ++            ++   ++ +++e+++++++++   l++++   +kl ++ i l+  + +d+ + iFe++Ns+  +Lt+++l+++++
  VIMSS18932  97 RKP-----------SEPSVKIVENFELFEKWISENtdKLETIFkglKKLMIVWISLD--KGKDDPQLIFESMNSKDIELTQTDLIRNYI 172
                 443...........7777788888888888888877733333234477788888888..55679***********************97 PP

  == domain 2  score: -20.8 bits;  conditional E-value: 1
      DUF262 108 reresdkellqklirseklsleekeelselnsltkkdlakeekrneeknlikayevikeilksallsalkeklslieielededdedqayeiFerlN 204
                 +      +  +++ ++e+ +l+++++ ++l+s++++  ++e ++ ++++++++ e i+e++++   +  +  +++++i + d+  +++  +++ ++N
  VIMSS18932 514 K------KEKKEKKEKEEYKLKKEKKVYDLSSYKFSSDSRELFDILREKIKALDERITEKFNQ---K--YIAYKFCKISFVDIVVQEKGLKLYLKMN 599
                 1......11111222222222223333333343433334444444444444444444443333...2..2466677777777777777888888887 PP



Or compare VIMSS18932 to CDD or PaperBLAST