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Align VIMSS19045 to PF03235 (DUF262)

VIMSS19045 has 681 amino acids

Query:       DUF262  [M=221]
Accession:   PF03235.14
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    6.1e-32   97.7   3.9    6.1e-32   97.7   3.9    2.8  3  VIMSS19045  


Domain annotation for each sequence (and alignments):
>> VIMSS19045  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   97.7   3.9   6.1e-32   6.1e-32      10     220 ..      17     216 ..       5     217 .. 0.76
   2 ?   -1.5   0.0      0.13      0.13     149     190 ..     376     445 ..     341     462 .. 0.57
   3 ?   -0.8   0.5     0.078     0.078     139     188 ..     572     607 ..     504     629 .. 0.52

  Alignments for each domain:
  == domain 1  score: 97.7 bits;  conditional E-value: 6.1e-32
      DUF262  10 rglriPdfQRpyvWeeeqveeLiedlla....lkgyplGsivlw.....skaads..ageleviDGQQRltTltlllaatkeesekriknleaeiek.e 96 
                 + + iP +QR+y Wee+++e+L++d+      +k +++Gsi        + +++    +e+ +iDGQQR+tTl+lll+a    +e +i n e + e  +
  VIMSS19045  17 TIFSIPVYQRNYTWEEKNCEKLLQDIISisqnKKTHFMGSITYIlhwidD-EKSLrkLQEFVIIDGQQRITTLMLLLKA----IETKIPNEEVKKEIdN 110
                 3389*************************************999999853.22225799********************....3333333333333335 PP

      DUF262  97 keeededrlkrreresdkellqkllrseklsleekeelaelnsltkkdlakeekrneeknlikayevieeilksa.........llsalktklslieie 186
                 +++   ++l++++ +sdke ++  +++++ +                        +  + ++++y++++++l+++          + a+  +l+++ i 
  VIMSS19045 111 LLNLSGQKLRLKPIKSDKEAFDLVMQNRSHE-----------------------IQGVSHIRNNYKFFTKELDNHiskgyrieeIYGAF-LRLKIVAIG 185
                 6677788999999999999999999999876.......................44556666666666666666665555444423333.678899999 PP

      DUF262 187 leseddedqayeiFerlNsrGvpLtasellkall 220
                 le    ed+ + +Fe++N+ Gv+L+  +l++++l
  VIMSS19045 186 LE--LGEDDPQVVFESINA-GVQLKGLDLIRNYL 216
                 99..66689*********7.9***********98 PP

  == domain 2  score: -1.5 bits;  conditional E-value: 0.13
      DUF262 149 ekrneeknlikayevieeilksa.........................llsalk...tklslieielese 190
                  + ++ + l+++y+++ee ++ +                         l+++ +   + +++i +e+e+ 
  VIMSS19045 376 STPTLTRVLYSLYRQLEEDVSADalkrylgksvgqmafpnddkikaafLVRNAYaanQVCKFILLEIEKL 445
                 4445555556666666655555566666666666666665555555553333333335555555555544 PP

  == domain 3  score: -0.8 bits;  conditional E-value: 0.078
      DUF262 139 sltkkdlakeekrneeknlikayevieeilksallsalktklslieiele 188
                 +lt ++l++ +  n+++++ ++ + +++               +i + le
  VIMSS19045 572 DLTSHNLQSVKLPNHQRKIARNAKELAS--------------AVIDYLLE 607
                 2222222333333333333333333333..............22222222 PP



Or compare VIMSS19045 to CDD or PaperBLAST