VIMSS19045 has 681 amino acids
Query: DUF262 [M=221]
Accession: PF03235.17
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6e-32 97.7 4.0 6e-32 97.7 4.0 2.8 3 VIMSS19045
Domain annotation for each sequence (and alignments):
>> VIMSS19045
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 97.7 4.0 6e-32 6e-32 11 220 .. 18 216 .. 4 217 .. 0.76
2 ? -1.7 0.0 0.15 0.15 149 190 .. 376 445 .. 341 453 .. 0.53
3 ? -1.7 2.6 0.15 0.15 133 133 .. 560 560 .. 379 640 .. 0.63
Alignments for each domain:
== domain 1 score: 97.7 bits; conditional E-value: 6e-32
DUF262 11 glriPdfQRpyvWeeeqieeLiedlla....lrgyplGsivlw.....skaads...ageleviDGQQRltTltlllaatkeesekriknleaeiek.e 96
+ iP +QR+y Wee+++e+L++d+ ++ +++Gsi +++ s +e+ +iDGQQR+tTl+lll+a +e +i n e + e +
VIMSS19045 18 IFSIPVYQRNYTWEEKNCEKLLQDIISisqnKKTHFMGSITYIlhwidDEK--SlrkLQEFVIIDGQQRITTLMLLLKA----IETKIPNEEVKKEIdN 110
289*************************************99999985322..235799********************....3333333333333335 PP
DUF262 97 keeededrlkrreresdkellqklirseklsleekeelselnsltkkdlakeekrneeknlikayevikeilksa.........llsalkeklslieie 186
+++ ++l++++ +sdke ++ +++++ + + + ++++y++++++l+++ + a+ l+++ i
VIMSS19045 111 LLNLSGQKLRLKPIKSDKEAFDLVMQNRSHEI-----------------------QGVSHIRNNYKFFTKELDNHiskgyrieeIYGAF-LRLKIVAIG 185
66778889999999999999999999998764.......................4455666666666666666655555444322233.578899999 PP
DUF262 187 lededdedqayeiFerlNsrGvpLtasellkall 220
le ed+ + +Fe++N+ Gv+L+ +l++++l
VIMSS19045 186 LE--LGEDDPQVVFESINA-GVQLKGLDLIRNYL 216
99..56678*********7.9***********98 PP
== domain 2 score: -1.7 bits; conditional E-value: 0.15
DUF262 149 ekrneeknlikayevikeilksa.........................llsalk...eklslieielede 190
+ ++ + l+++y++++e ++ + l+++ + + +++i +e+e+
VIMSS19045 376 STPTLTRVLYSLYRQLEEDVSADalkrylgksvgqmafpnddkikaafLVRNAYaanQVCKFILLEIEKL 445
4445555556666666655555566666666666666665555555553333332224455555555544 PP
== domain 3 score: -1.7 bits; conditional E-value: 0.15
DUF262 133 e 133
VIMSS19045 560 Y 560
1 PP
Or compare VIMSS19045 to CDD or PaperBLAST