VIMSS19820 has 578 amino acids
Query: DUF262 [M=199]
Accession: PF03235.18
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-40 125.9 8.3 1.2e-40 125.9 8.3 3.0 2 VIMSS19820
Domain annotation for each sequence (and alignments):
>> VIMSS19820
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 125.9 8.3 1.2e-40 1.2e-40 3 198 .. 14 235 .. 12 236 .. 0.75
2 ? -6.6 8.5 1 1 90 90 .. 474 474 .. 266 576 .. 0.64
Alignments for each domain:
== domain 1 score: 125.9 bits; conditional E-value: 1.2e-40
DUF262 3 dllskkksgfliPdyQRgyvWdeeqvedLiedike......lrgyplGsivlwkeaededgkyeviDGQQRltTltlllka....lee.d...ekekee 87
++l +++ +++PdyQR+yvWd+++ Li+d+ + +y++Gsiv+ ++++d++++v+DGQQRlt++++l + + + + e+++ +
VIMSS19820 14 QILVDRDYFYQVPDYQRPYVWDKDHLGALIDDLVGsytnnrEDEYFCGSIVI--VENQKDKRWDVVDGQQRLTSFIILACTilrlY-KhSlgqESKDFI 109
6666666668***********************99*****************..66777*********************977641.231344444444 PP
DUF262 88 eeklkle.kreedkdffekllenekeelek.leklkelngkkfkdlseeekseseknlikayelikek..................ai.eklklveiel 165
e+++ + +e+ + +f + +++++ ++ l++l+++++ k+++l++ + +e++++++ ++ke ++ e++ l++i +
VIMSS19820 110 EDSIYDRyDKEKERLKFLTAQNYNSIFENTvLNHLEFEDNIKKSELNK---KFEENTYLRNAYYFKELlnesvengsisdiddfvkWFyEHIVLTRIIC 205
444433334444444444444444444444466666666666666644...667777777777777778888888888888887754468999999999 PP
DUF262 166 ddeddedeafeiFerlNsrGvpLsaadllkall 198
++d+ a +iF++lN+rG pLs+ d+lk+ l
VIMSS19820 206 FEQDS---AMQIFQVLNDRGQPLSPIDILKSSL 235
97666...**********************987 PP
== domain 2 score: -6.6 bits; conditional E-value: 1
DUF262 90 k 90
+
VIMSS19820 474 Q 474
2 PP
Or compare VIMSS19820 to CDD or PaperBLAST