VIMSS245562 has 565 amino acids
Query: DUF262 [M=221]
Accession: PF03235.17
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.2e-38 117.1 0.5 1.2e-37 116.3 0.5 1.4 1 VIMSS245562
Domain annotation for each sequence (and alignments):
>> VIMSS245562
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 116.3 0.5 1.2e-37 1.2e-37 2 220 .. 13 238 .. 12 239 .. 0.76
Alignments for each domain:
== domain 1 score: 116.3 bits; conditional E-value: 1.2e-37
DUF262 2 edllskskrglriPdfQRpyvWeeeqieeLiedlla...........lrgyplGsivlwskaadsageleviDGQQRltTltlllaatkeesekrikn 88
+dll + +++ +Pd+QR+y+W+e++++ +++d+l +++y++Gs+v d+a ++e++DGQQRl T+++ll+a + +r+
VIMSS245562 13 GDLLGDVAKKTSVPDYQRDYSWTESHVDYFWQDVLGfmreqnektlaDAEYFIGSMVR----VDKAERYELLDGQQRLATIVILLSA----IRDRLRP 102
68888888889**********************************************9....66799********************....4444444 PP
DUF262 89 leaeiek.........ekeeededrlkrreresdkellqklirseklsleekeelse.lnsltkkdlakeekrneeknlikayevikeilksa..... 171
l+ ++ e++ + e++++++ + +d++++++ i+++ + ++ ++s+ l ++ ++++ ++ l + ++ ++ +
VIMSS245562 103 LNTKAYIktqgrwiaeEDDLTGESKYSLTLSTYDRDYFRRRIQNDPVETLKPATASQtLIDAARRKF--------DAELTSELDKQPDE---Kgreqw 189
444433355667777778888999*********************9999995444430334444444........33333333333332...233354 PP
DUF262 172 ...llsalkeklslieielededdedqayeiFerlNsrGvpLtasellkall 220
l + + +++ +++++ +e+d a+ iFe+lN+rG+ L++ +ll++++
VIMSS245562 190 lllLRDVIMNHVTTVTVTCASEQD---AASIFETLNDRGLGLSTVDLLRNFV 238
443334555667777777766666...***********************87 PP
Or compare VIMSS245562 to CDD or PaperBLAST