VIMSS245562 has 565 amino acids
Query: DUF262 [M=221]
Accession: PF03235.14
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1e-37 116.5 0.5 1.8e-37 115.8 0.5 1.4 1 VIMSS245562
Domain annotation for each sequence (and alignments):
>> VIMSS245562
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 115.8 0.5 1.8e-37 1.8e-37 2 220 .. 13 238 .. 12 239 .. 0.74
Alignments for each domain:
== domain 1 score: 115.8 bits; conditional E-value: 1.8e-37
DUF262 2 edllskskrglriPdfQRpyvWeeeqveeLiedlla...........lkgyplGsivlwskaadsageleviDGQQRltTltlllaatkeesekrikn 88
+dll + +++ +Pd+QR+y+W+e++v+ +++d+l +++y++Gs+v d+a ++e++DGQQRl T+++ll a + +r+
VIMSS245562 13 GDLLGDVAKKTSVPDYQRDYSWTESHVDYFWQDVLGfmreqnektlaDAEYFIGSMVR----VDKAERYELLDGQQRLATIVILLSA----IRDRLRP 102
68888999889**********************************************9....66799********************....4444433 PP
DUF262 89 leaeiek.........ekeeededrlkrreresdkellqkllrseklslee.keelaelnsltkkdlakeekrneeknlikayevieeilksa..... 171
l+ ++ e++ + e++++++ + +d++++++ ++++ + ++ + ++ l ++ ++++ ++ l + ++ ++ +
VIMSS245562 103 LNTKAYIktqgrwiaeEDDLTGESKYSLTLSTYDRDYFRRRIQNDPVETLKpATASQTLIDAARRKF--------DAELTSELDKQPDE---Kgreqw 189
3333333455567666777788999********************9999993433333334344444........33333333333322...233354 PP
DUF262 172 ...llsalktklslieieleseddedqayeiFerlNsrGvpLtasellkall 220
l + + +++ +++++ se+d a+ iFe+lN+rG+ L++ +ll++++
VIMSS245562 190 lllLRDVIMNHVTTVTVTCASEQD---AASIFETLNDRGLGLSTVDLLRNFV 238
443334455666666666665555...***********************87 PP
Or compare VIMSS245562 to CDD or PaperBLAST