VIMSS246806 has 605 amino acids
Query: DUF262 [M=221]
Accession: PF03235.14
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.9e-29 88.9 0.0 8e-29 87.5 0.0 1.7 1 VIMSS246806
Domain annotation for each sequence (and alignments):
>> VIMSS246806
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 87.5 0.0 8e-29 8e-29 1 220 [. 9 253 .. 9 254 .. 0.70
Alignments for each domain:
== domain 1 score: 87.5 bits; conditional E-value: 8e-29
DUF262 1 ledllskskrg.lriPdfQRpyvWeeeqveeLiedllalkgyplGsivlw................skaadsageleviDGQQRltTltlllaa.... 77
l+d+l + ++g l++PdfQR+++W++++++ i + ++yplG +++ + ++d a l+++DGQQRlt+l+ l+
VIMSS246806 9 LKDVLADVASGsLQLPDFQRNWKWDDDRIRAIIATV--TLDYPLGVVMTLqtggatrfrsrtltgaQPDGDPAADLLLLDGQQRLTSLFQSLWLdapv 104
5778888888889***********************..*************************998777788******************99986566 PP
DUF262 78 ....t.....keesekriknleaeiek.ekeeededrlkrreresdkellqkllrseklsleekeelaelnsltkkdl.........akeekrneekn 156
+ + ++ +i++++ + + ++ k+ +++ ++ + +l +e + + +++l + ++++ + ++
VIMSS246806 105 etadSrgkaiQRWYYVDIAKAVGPSADrDEAVVSVPADKVLRTDFNRTVVLDLSTTEAECAAGLFPLHFVFDAQRVNEwkrayikadEE--------- 193
54330333343333333333333333342222222333555666777777777777777777766666655322222232222222222......... PP
DUF262 157 likayevieeilksa.........llsalktklslieieleseddedqayeiFerlNsrGvpLtasellkall 220
+++ +l+ + +++ i l +++ d+++ +Fer+N++GvpL+ +ell a +
VIMSS246806 194 ------------RNWdrwgqfdeaVLQQV-RAFQVPMIRLAASTSMDAVCAVFERVNTGGVPLNVFELLTATY 253
............22233344333333333.56899999999999*************************9987 PP
Or compare VIMSS246806 to CDD or PaperBLAST