VIMSS260588 has 608 amino acids
Query: DUF262 [M=221]
Accession: PF03235.17
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.2e-31 95.3 4.6 3.2e-31 95.3 4.6 3.3 3 VIMSS260588
Domain annotation for each sequence (and alignments):
>> VIMSS260588
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 95.3 4.6 3.2e-31 3.2e-31 12 218 .. 17 211 .. 6 213 .. 0.85
2 ! 3.2 8.3 0.0049 0.0049 81 220 .. 335 456 .. 276 457 .. 0.54
3 ? -2.1 1.2 0.2 0.2 151 151 .. 535 535 .. 459 604 .. 0.47
Alignments for each domain:
== domain 1 score: 95.3 bits; conditional E-value: 3.2e-31
DUF262 12 lriPdfQRpyvWeeeqieeLiedllalrgyplGsivlwskaadsageleviDGQQRltTltlllaatkeesekriknleaeiekekeeededrlkrre 109
l++P fQR vW+++q +e+++ l + g+p+Gsi+l++ ++++++ +iDG QR +T++ ++++ ++ ++++++ +i e+++ ++++k +
VIMSS260588 17 LKLPTFQRALVWSNNQKQEFFSTL--KDGFPFGSILLYE--YENDNKYSLIDGLQRYSTMVDFMEN--PTNYIEFEDFTLKIA-ELYKGASESTKAEV 107
799*********************..***********43..5569*********************..777777777777777.57788999999*** PP
DUF262 110 resdkellqklirseklsleekeelselnsltkkdl....akeekrneeknlikayevikeilksallsalkeklslieielededdedqayeiFerl 203
+++++ l k+i+++ +s +e+++ +el ++ +++ + + +++ + +++ +++++l+ ++++ i++e +e + +e+F+rl
VIMSS260588 108 VNYAEDILLKIIEKYIDSTKENVKVNELAKKMVDKFpvlgETDIRDEITQIQSDVITYFNNQLD-------ISNVKIPCIFFE--GEETELAEVFQRL 196
*************************999999999998886666666666666677777776433.......578899999999..67779******** PP
DUF262 204 NsrGvpLtasellka 218
Ns+G++L++ + a
VIMSS260588 197 NSGGKKLSKYQVFAA 211
********9988876 PP
== domain 2 score: 3.2 bits; conditional E-value: 0.0049
DUF262 81 esekriknleaeiek..ekeeededrlkrreresdkellqklirseklsleekeelselnsltkkdlakeekrneeknlikayevikeilksallsal 176
+++k i+n +e++ + ed+ ++k+ +r + +++++l+ s++ +++++++++ ++tk+ ++++ ++ ++++
VIMSS260588 335 KIYKIINNKFKEAFSmvVSSREDKYETKSFTRLQIMSFFSSLWISSYSIELDENKNTFSIKQTKSLKKNQQVILSNIIIYAI---------------- 416
2233333333333333322223333333334445555555555555554444333333222222222222222222222222................ PP
DUF262 177 keklslieielededdedqayeiFerlNsrGvpLtasellkall 220
+++i+ + + + +++ +i+++ N+r ++ a e ++++l
VIMSS260588 417 ---YDVIRKYWSG-TGDRKLMDIYISQNNRYLKPLAKEVFRNEL 456
...3333333333.66699*********************9997 PP
== domain 3 score: -2.1 bits; conditional E-value: 0.2
DUF262 151 r 151
r
VIMSS260588 535 R 535
2 PP
Or compare VIMSS260588 to CDD or PaperBLAST