VIMSS260588 has 608 amino acids
Query: DUF262 [M=221]
Accession: PF03235.14
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3e-31 95.4 4.5 3e-31 95.4 4.5 3.3 3 VIMSS260588
Domain annotation for each sequence (and alignments):
>> VIMSS260588
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 95.4 4.5 3e-31 3e-31 12 218 .. 17 211 .. 6 213 .. 0.85
2 ! 2.6 8.6 0.0073 0.0073 81 220 .. 335 456 .. 275 457 .. 0.56
3 ? -2.5 1.2 0.27 0.27 103 138 .. 476 511 .. 458 591 .. 0.49
Alignments for each domain:
== domain 1 score: 95.4 bits; conditional E-value: 3e-31
DUF262 12 lriPdfQRpyvWeeeqveeLiedllalkgyplGsivlwskaadsageleviDGQQRltTltlllaatkeesekriknleaeiekekeeededrlkrre 109
l++P fQR vW+++q +e+++ l + g+p+Gsi+l+ + ++++++ +iDG QR +T++ ++++ ++ ++++++ +i e+++ ++++k +
VIMSS260588 17 LKLPTFQRALVWSNNQKQEFFSTL--KDGFPFGSILLY--EYENDNKYSLIDGLQRYSTMVDFMEN--PTNYIEFEDFTLKIA-ELYKGASESTKAEV 107
799*********************..***********4..35569*********************..777777777777777.577889999999** PP
DUF262 110 resdkellqkllrseklsleekeelaelnsltkkdl....akeekrneeknlikayevieeilksallsalktklslieieleseddedqayeiFerl 203
+++++ l k+++++ +s +e+++ +el ++ +++ + + +++ + +++ +++++l+ ++++ i++e +e + +e+F+rl
VIMSS260588 108 VNYAEDILLKIIEKYIDSTKENVKVNELAKKMVDKFpvlgETDIRDEITQIQSDVITYFNNQLD-------ISNVKIPCIFFE--GEETELAEVFQRL 196
**************************99999999998886666666666666777777777433.......578899999999..77889******** PP
DUF262 204 NsrGvpLtasellka 218
Ns+G++L+++ + a
VIMSS260588 197 NSGGKKLSKYQVFAA 211
*********998876 PP
== domain 2 score: 2.6 bits; conditional E-value: 0.0073
DUF262 81 esekriknleaeiek..ekeeededrlkrreresdkellqkllrseklsleekeelaelnsltkkdlakeekrneeknlikayevieeilksallsal 176
+++k i+n +e++ + ed+ ++k+ +r + +++++l+ s++ +++++++++ ++tk+ ++++ ++ ++++y+vi+
VIMSS260588 335 KIYKIINNKFKEAFSmvVSSREDKYETKSFTRLQIMSFFSSLWISSYSIELDENKNTFSIKQTKSLKKNQQVILSNIIIYAIYDVIR----------- 421
233333333333333332222333333444444555555555555555555433333322222222222222222222233333333........... PP
DUF262 177 ktklslieieleseddedqayeiFerlNsrGvpLtasellkall 220
+ + + +++ +i+++ N+r ++ a e ++++l
VIMSS260588 422 --------KYWSG-TGDRKLMDIYISQNNRYLKPLAKEVFRNEL 456
........33333.66699********************99987 PP
== domain 3 score: -2.5 bits; conditional E-value: 0.27
DUF262 103 drlkrreresdkellqkllrseklsleekeelaeln 138
+ + + ++ ++++++l+++ + + + ++l++l
VIMSS260588 476 KMIITFIANKFRSFYSSLNDNLDYEHIFSRKLYKLH 511
333333444444444444444444444444433333 PP
Or compare VIMSS260588 to CDD or PaperBLAST