VIMSS27316 has 706 amino acids
Query: DUF262 [M=221]
Accession: PF03235.17
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-41 129.3 4.8 1.3e-41 129.3 4.8 4.1 3 VIMSS27316
Domain annotation for each sequence (and alignments):
>> VIMSS27316
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 129.3 4.8 1.3e-41 1.3e-41 5 220 .. 12 216 .. 8 217 .. 0.71
2 ? 1.3 0.7 0.018 0.018 109 184 .. 222 300 .. 218 338 .. 0.64
3 ? -11.7 21.0 1 1 96 185 .. 558 628 .. 344 663 .. 0.64
Alignments for each domain:
== domain 1 score: 129.3 bits; conditional E-value: 1.3e-41
DUF262 5 lskskrg.lriPdfQRpyvWeeeqieeLiedlla......lrgyplGsivlwskaadsageleviDGQQRltTltlllaa..t...keesekriknlea 91
+++++++ ++iP++QR y+We+eq+e+L++d+ + g+++Gsi+ + +++ ++ l++iDGQQRltT+tll a + +e + ++i++++
VIMSS27316 12 FEENQNNqFVIPIYQRVYSWEKEQCEQLWDDIIKiggndkINGHFIGSILYVLDGNTPSSPLLIIDGQQRLTTITLLCIAlrShlsDEVKREEIESYLI 110
55555556*******************************99**********9888888**********************3212233333333333333 PP
DUF262 92 eiekekeeededrlkrreresdkellqklirseklsleekeelselnsltkkdlakeekrneeknlikayevikeilksa..llsalk...eklsliei 185
+++ + +++++ +esdk+ l +li+++k ++ ++ ++++++++++++++++ l++++ ekl ++ i
VIMSS27316 111 NSD----KDGDKKFRLILSESDKDTLLSLIDKNKRKP----------------------SEPSVKIMENFKLFEKWISKNtdKLETIFkglEKLMIVYI 183
333....233444444455555555555555555444......................5555566666666666666666633333223377889999 PP
DUF262 186 elededdedqayeiFerlNsrGvpLtasellkall 220
l+ +++d+ + iFe++Ns+G +Lt+++l+++++
VIMSS27316 184 ALD--KEKDDPQLIFESMNSKGIELTQTDLIRNYI 216
999..56779***********************97 PP
== domain 2 score: 1.3 bits; conditional E-value: 0.018
DUF262 109 eresdkellqklirseklsleekeelselnsltkkdlakeekrneeknlikayevikeilksa......llsal.keklslie 184
++e++k++++ ++r ++ ++++e+l+++ + ++ k+ + +n++k+y +k++ +++ ll+ l k+ ++++
VIMSS27316 222 TEEKQKDFYNGYWRAMEEDFKQNETLFNRFVRHYLTI----KTGKIPNIKKVYGAFKDYQQKEgieiedLLKDLqKYCGYFCQ 300
5567777777777777777777666666555555555....677788888888888876665566655533333122233333 PP
== domain 3 score: -11.7 bits; conditional E-value: 1
DUF262 96 ekeeededrlkrreresdkellqklirseklslee.keelselnsltkkdlakeekrneeknlikayevikeilksallsalkeklsliei 185
+k+e++e++ k +++e++ ++ +k ++ ++ +++ +el+++ ++ k+l+++ ++n+++++ +++ +i
VIMSS27316 558 PKKEKKEKKEKKEKEEYKLKKEKKVYDLSSYKFSPhSRELFDILRKEIKTLDERVTENFNSKY--------------------IAYKFFKI 628
111111111111111111111111111111111111122222222222222222222211111....................22222222 PP
Or compare VIMSS27316 to CDD or PaperBLAST