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Align VIMSS27426 to PF03235 (DUF262)

VIMSS27426 has 683 amino acids

Query:       DUF262  [M=221]
Accession:   PF03235.14
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
    9.9e-35  106.8   4.6    9.9e-35  106.8   4.6    2.7  2  VIMSS27426  


Domain annotation for each sequence (and alignments):
>> VIMSS27426  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  106.8   4.6   9.9e-35   9.9e-35       9     220 ..      16     217 ..       5     218 .. 0.74
   2 ?   -1.6   2.1      0.14      0.14     123     123 ..     531     531 ..     380     637 .. 0.59

  Alignments for each domain:
  == domain 1  score: 106.8 bits;  conditional E-value: 9.9e-35
      DUF262   9 krglriPdfQRpyvWeeeqveeLiedlla....lkgyplGsivlw......skaads..ageleviDGQQRltTltlllaatkeesekriknleaeiek 95 
                  + + iP +QR+y Weee++e+L++d+++    +k +++Gsi         +k       +e+ +iDGQQR+tT++lll+a   e + + + +++ei++
  VIMSS27426  16 GTIFSIPVYQRNYTWEEENCEKLLQDIVNisqnKKTHFMGSITYIlhliddEKS--LrqLQEFVIIDGQQRITTIMLLLKA--IETKIQNEGIKKEIDG 110
                 33389**************************************99*99853222..2569*********************..4444444444444444 PP

      DUF262  96 ekeeededrlkrreresdkellqkllrseklsleekeelaelnsltkkdlakeekrneeknlikayevieeilksa.........llsalktklsliei 185
                  +++   +rl++++ +sdke ++  +++++ + +                         + ++++y++++++l+++          + a+   l+++ i
  VIMSS27426 111 -LLNLSGQRLRLKPIKSDKEAFDLVMQNRSHEIQG-----------------------VSHIKNNYKFFTKELDNYiskgyrieeIYGAF-LWLKIVAI 184
                 .557788999999999*********9999986544.......................44444444444444444443333333312222.33456777 PP

      DUF262 186 eleseddedqayeiFerlNsrGvpLtasellkall 220
                  le    ed+ + +Fe++N++Gv+L+  +l++++l
  VIMSS27426 185 GLE--LGEDDPQVVFESINATGVQLKGLDLIRNYL 217
                 777..56678***********************98 PP

  == domain 2  score: -1.6 bits;  conditional E-value: 0.14
      DUF262 123 s 123
                 s
  VIMSS27426 531 S 531
                 0 PP



Or compare VIMSS27426 to CDD or PaperBLAST