VIMSS27426 has 683 amino acids
Query: DUF262 [M=221]
Accession: PF03235.17
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9e-35 106.9 4.5 9e-35 106.9 4.5 2.7 2 VIMSS27426
Domain annotation for each sequence (and alignments):
>> VIMSS27426
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 106.9 4.5 9e-35 9e-35 10 220 .. 17 217 .. 5 218 .. 0.74
2 ? -1.6 2.0 0.14 0.14 185 185 .. 524 524 .. 378 629 .. 0.58
Alignments for each domain:
== domain 1 score: 106.9 bits; conditional E-value: 9e-35
DUF262 10 rglriPdfQRpyvWeeeqieeLiedlla....lrgyplGsivlw......skaads...ageleviDGQQRltTltlllaatkeesekriknleaeiek 95
+ + iP +QR+y Weee++e+L++d+++ ++ +++Gsi + + s +e+ +iDGQQR+tT++lll+a e + + + +++ei++
VIMSS27426 17 TIFSIPVYQRNYTWEEENCEKLLQDIVNisqnKKTHFMGSITYIlhliddE-K--SlrqLQEFVIIDGQQRITTIMLLLKA--IETKIQNEGIKKEIDG 110
3389**************************************99*998632.2..22469*********************..4444444444455554 PP
DUF262 96 ekeeededrlkrreresdkellqklirseklsleekeelselnsltkkdlakeekrneeknlikayevikeilksa.........llsalkeklsliei 185
+++ +rl++++ +sdke ++ +++++ + + + ++++y++++++l+++ + a+ l+++ i
VIMSS27426 111 -LLNLSGQRLRLKPIKSDKEAFDLVMQNRSHEIQG-----------------------VSHIKNNYKFFTKELDNYiskgyrieeIYGAF-LWLKIVAI 184
.556788999999999*******999999986444.......................44444444444444444443333333211111.33456777 PP
DUF262 186 elededdedqayeiFerlNsrGvpLtasellkall 220
le ed+ + +Fe++N++Gv+L+ +l++++l
VIMSS27426 185 GLE--LGEDDPQVVFESINATGVQLKGLDLIRNYL 217
777..55678***********************98 PP
== domain 2 score: -1.6 bits; conditional E-value: 0.14
DUF262 185 i 185
+
VIMSS27426 524 Y 524
1 PP
Or compare VIMSS27426 to CDD or PaperBLAST