VIMSS27727 has 291 amino acids
Query: DUF262 [M=221]
Accession: PF03235.17
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.7e-36 110.2 6.4 1.2e-35 109.8 6.4 1.2 1 VIMSS27727
Domain annotation for each sequence (and alignments):
>> VIMSS27727
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 109.8 6.4 1.2e-35 1.2e-35 6 220 .. 14 263 .. 4 264 .. 0.74
Alignments for each domain:
== domain 1 score: 109.8 bits; conditional E-value: 1.2e-35
DUF262 6 skskrg.lriPdfQRpyvW....eeeqieeLiedllalrgyplGsivlw........................................skaadsagel 59
++ + g + +Pd+QR+yvW + ++ie+L++++ lrgyp+G +++w ++ + ++ +
VIMSS27727 14 DELN-GrYFLPDIQREYVWlqnaDGKKIEQLFDSI--LRGYPIGFFLFWklpkediaksdeqdsdklnfqlyqfitnyderkphnekirIEQIKRDDLY 109
4333.249***********88777788********..*********************************************99998653334449*** PP
DUF262 60 eviDGQQRltTltlllaat..keesekriknleaeiekekeeededrlkrreresdkellqklirseklsleekeelselnsltkkdl........... 145
+v+DGQQRlt+l++ l++t + k+ +a ++ + + ++e+rl+++ +++ + + + + + ++ ++ e++++ ++++ d+
VIMSS27727 110 IVLDGQQRLTSLYIGLKGTrtL-------KKKNARYD-NPNAYEEKRLYLNLKHQPNMDNPEDNYEFEFHAQKPENDKKHWWFKVGDIleseshvwnya 200
******************2222.......22222222.2223444444444333222222222222222223333333344444444445556777777 PP
DUF262 146 .akeekrneeknlikayevikeilksallsalkeklslieielededdedqayeiFerlNsrGvpLtasellkall 220
++ k ne k l ++++ +++ +l++++ e e++ +++ +iF+r+Ns+Gv+L+ s+ll+++l
VIMSS27727 201 dEHGLKGNELKLLGDLHRAFHT-------------KQLVSFFEETEKNLNKVLNIFIRVNSGGVKLSYSDLLMSIL 263
7777889999999999999998.............69***********************************9976 PP
Or compare VIMSS27727 to CDD or PaperBLAST