VIMSS27808 has 217 amino acids
Query: DUF262 [M=221]
Accession: PF03235.14
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.7e-34 103.6 2.1 1.7e-33 102.8 2.1 1.3 1 VIMSS27808
Domain annotation for each sequence (and alignments):
>> VIMSS27808
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 102.8 2.1 1.7e-33 1.7e-33 11 220 .. 13 208 .. 6 209 .. 0.76
Alignments for each domain:
== domain 1 score: 102.8 bits; conditional E-value: 1.7e-33
DUF262 11 g.lriPdfQRpyvWeeeqveeLiedlla.....lkgyplGsivlw.skaadsageleviDGQQRltTltlllaatkeesekriknleaeiekekeeede 102
g ++iP++QR+y+W+ +q++++++dl++ +k +++ s+ l +++ +++ +e+iDGQQRl T+ +ll +
VIMSS27808 13 GvFEIPSYQRGYAWQVRQWKDFWNDLEHvsklgNKFHYMHSLTLRgLENELEDSAFEIIDGQQRLATSLILLGL------------L-----------A 88
3499**********************99****************65444444******************9888............2...........2 PP
DUF262 103 drlkrreresdkellqkllrseklsleekeelaelnsltkkdlakeekrneeknlikayevieeilksa.......llsalktklslieielesedded 194
+ +k++ ++++ l+ l++++ l+e++ + ++kdl++ +++ + knli+ay +++e++++ +++ l +k+ + + el d+
VIMSS27808 89 KTTKHKDPKYNSMNLEPVLSYKYYGLNEAFGAIM---GEEKDLERFQTSFYAKNLIDAYAFFKEKISDTpmetlekMFDVLTKKMLFSVAELN--DNRI 182
2233334444444455555555544444333333...34566667788****************99999999866655555555556666665..8999 PP
DUF262 195 qayeiFerlNsrGvpLtasellkall 220
+ + Fe++N+rG+ L++ el+k++l
VIMSS27808 183 DPFSSFETINNRGKDLSTLELFKNRL 208
9***********************97 PP
Or compare VIMSS27808 to CDD or PaperBLAST