VIMSS27808 has 217 amino acids
Query: DUF262 [M=221]
Accession: PF03235.17
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.7e-34 103.7 2.1 1.5e-33 102.9 2.1 1.3 1 VIMSS27808
Domain annotation for each sequence (and alignments):
>> VIMSS27808
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 102.9 2.1 1.5e-33 1.5e-33 11 220 .. 13 208 .. 5 209 .. 0.76
Alignments for each domain:
== domain 1 score: 102.9 bits; conditional E-value: 1.5e-33
DUF262 11 g.lriPdfQRpyvWeeeqieeLiedlla.....lrgyplGsivlw.skaadsageleviDGQQRltTltlllaatkeesekriknleaeiekekeeede 102
g ++iP++QR+y+W+ +q++++++dl++ ++ +++ s+ l +++ +++ +e+iDGQQRl T+ +ll +a
VIMSS27808 13 GvFEIPSYQRGYAWQVRQWKDFWNDLEHvsklgNKFHYMHSLTLRgLENELEDSAFEIIDGQQRLATSLILLGL------------LA----------- 88
3499**********************99****************65444445******************9888............22........... PP
DUF262 103 drlkrreresdkellqklirseklsleekeelselnsltkkdlakeekrneeknlikayevikeilksa.......llsalkeklslieielededded 194
+ +k++ ++++ l+ +++++ l+e++ + ++kdl++ +++ + knli+ay ++ke++++ +++ l +k+ + + el d+
VIMSS27808 89 KTTKHKDPKYNSMNLEPVLSYKYYGLNEAFGAIM---GEEKDLERFQTSFYAKNLIDAYAFFKEKISDTpmetlekMFDVLTKKMLFSVAELN--DNRI 182
2233334444444444455555444444333333...34566677789****************99999999866655555555555555555..8999 PP
DUF262 195 qayeiFerlNsrGvpLtasellkall 220
+ + Fe++N+rG+ L++ el+k++l
VIMSS27808 183 DPFSSFETINNRGKDLSTLELFKNRL 208
9***********************97 PP
Or compare VIMSS27808 to CDD or PaperBLAST