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Align VIMSS28155 to PF03235 (DUF262)

VIMSS28155 has 314 amino acids

Query:       DUF262  [M=221]
Accession:   PF03235.17
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence   Description
    ------- ------ -----    ------- ------ -----   ---- --  --------   -----------
      1e-42  132.9   6.8      1e-42  132.9   6.8    1.5  2  VIMSS28155  


Domain annotation for each sequence (and alignments):
>> VIMSS28155  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.9   6.8     1e-42     1e-42       8     220 ..      18     234 ..       8     235 .. 0.77
   2 ?   -2.3   0.1      0.23      0.23     111     125 ..     267     281 ..     237     306 .. 0.49

  Alignments for each domain:
  == domain 1  score: 132.9 bits;  conditional E-value: 1e-42
      DUF262   8 skrglriPdfQRpyvWeeeqieeLiedlla......lrgyplGsivlwskaadsageleviDGQQRltTltlllaatkeesekriknleaeiek..eke 98 
                  +  +++P++QRpyvW++++   Li+dl+         +y++Gsiv+   +++++++++v+DGQQRlt++++l++         i +l+++  +   k+
  VIMSS28155  18 AEYFYQVPNYQRPYVWDKDHLGALIDDLVVsytnnrEDEYFCGSIVI--AENPKDKRWDVVDGQQRLTSFIILACT--------ILRLYKHRLGqkSKA 106
                 33338***********************99*****99**********..77888**********************........222222222233333 PP

      DUF262  99 eededrlkrreresdkellqklirseklsleekeelselnsltkkdl...akeekrneeknlikayevikeilksa...........llsalkeklsli 183
                   +e+ ++r+ +e+ + ++ + +++++  +     ++ l++l+++d    ++ +k+  e++++++  +++e l++            ++++++e++ l+
  VIMSS28155 107 FIEESIYDRHDKEKERLKFLTAQNYNSIFE-----NTVLKNLEFEDNikkSEWNKKFDENTYLRNAYYFRELLNESmengsisdmddFVKWFYEHIALT 200
                 333444444555555555555555555543.....34444444444444445566889999999999***998888*********************** PP

      DUF262 184 eielededdedqayeiFerlNsrGvpLtasellkall 220
                 +i++ + d+   a +iF++lN+rG pL++ ++lk+ l
  VIMSS28155 201 RIICFEQDS---AMQIFQVLNDRGQPLSPIDILKSSL 234
                 *****7666...**********************987 PP

  == domain 2  score: -2.3 bits;  conditional E-value: 0.23
      DUF262 111 esdkellqklirsek 125
                  + +++++ ++++  
  VIMSS28155 267 IDLEDFFNMYLEYAD 281
                 233334444444444 PP



Or compare VIMSS28155 to CDD or PaperBLAST