VIMSS28284 has 282 amino acids
Query: DUF262 [M=221]
Accession: PF03235.14
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-39 122.4 2.3 1.7e-39 122.4 2.3 1.7 2 VIMSS28284
Domain annotation for each sequence (and alignments):
>> VIMSS28284
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 122.4 2.3 1.7e-39 1.7e-39 3 220 .. 14 232 .. 12 233 .. 0.68
2 ? -1.1 0.2 0.095 0.095 110 139 .. 245 274 .. 231 280 .. 0.40
Alignments for each domain:
== domain 1 score: 122.4 bits; conditional E-value: 1.7e-39
DUF262 3 dllskskrg.lriPdfQRpyvWeeeqveeLiedlla......lkgyplGsivlw...skaadsageleviDGQQRltTltlllaa..t..keesekrik 87
d+l + ++iPd+QRpy W+e+++e+L++dl +gy++Gs+vl + + +a +++++DGQQRl+T++ll+++ t ++ ++
VIMSS28284 14 DILATALVSyYQIPDYQRPYQWTEKNCEKLLDDLFSsyeyykESGYFCGSLVLIvinTDSETNAETYDIVDGQQRLSTFILLAKVlaTlyDKDLDTTSR 112
55555555568******************************99***********986556666**********************32122222222222 PP
DUF262 88 nleaeiekekeeededrlkrrere.sdkellqkllrseklsleekeelaelnsltkkdlakeekrneeknlikayevieeilksa.......llsalkt 178
+l++++ + e+++rl ++ +k+++ + l++ ++s + +++n+++n++k+ ++++lk++ ++ +l+
VIMSS28284 113 ELLEKSLGDTGGEKRERLHFNAMGlNAKDDFVYALEHFNDS------------------QASKNKNNKNNYLKNAICLKDYLKEKeikdinaFITWLYF 193
22222222222333333333322223333333333333333..................4445577777777777777777777777777666667777 PP
DUF262 179 klslieieleseddedqayeiFerlNsrGvpLtasellkall 220
k+ +i+ ++ + + a +iF +lN+rG+pL a + +k +l
VIMSS28284 194 KVVFIKTTCPNV---SMALRIFSVLNARGLPLHAIDVFKVEL 232
777777777755...55*********************9776 PP
== domain 2 score: -1.1 bits; conditional E-value: 0.095
DUF262 110 resdkellqkllrseklsleekeelaelns 139
+ s ++ l++++++++ ++ +++e++++++
VIMSS28284 245 FLSRWSALHQKCSENESKFPKRKENKREKN 274
223344444444444444444333333332 PP
Or compare VIMSS28284 to CDD or PaperBLAST