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Align VIMSS307149 to PF03235 (DUF262)

VIMSS307149 has 739 amino acids

Query:       DUF262  [M=221]
Accession:   PF03235.14
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    1.1e-36  113.2   0.2    1.1e-36  113.2   0.2    2.1  2  VIMSS307149  


Domain annotation for each sequence (and alignments):
>> VIMSS307149  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  113.2   0.2   1.1e-36   1.1e-36       2     220 ..      51     264 ..      50     265 .. 0.78
   2 ?   -2.4   0.3      0.24      0.24     139     139 ..     450     450 ..     412     508 .. 0.45

  Alignments for each domain:
  == domain 1  score: 113.2 bits;  conditional E-value: 1.1e-36
       DUF262   2 edllskskrglriPdfQRpyvWeeeqveeLiedlla......lkgyplGsivlw...skaads...ageleviDGQQRltTltlllaa...t..kees 82 
                   d+l++s++ ++iP++QR y+W+e+q+++L++d+ +       + +++Gs+v          +    + l+viDGQQRltT +ll++a   +  ++e 
  VIMSS307149  51 LDFLKRSQQ-FVIPIYQRTYSWTEQQCRQLWDDIIRagkrddISAHFIGSVVYIeqgL-Y--QvsgISPLLVIDGQQRLTTAMLLIEAlsrHlgEDEV 144
                  578899888.*************************9*****99**********86642.2..2346999*******************3321332222 PP

       DUF262  83 ekriknleaeiek.............ekeeededrlkrreresdkellqkllrseklsleekeelaelnsltkkdlakeekrneeknlikayevieei 167
                              +             + +e+ e+ +k+  +e+dk+ l  l++++                          +n+ +++++++ +++e+
  VIMSS307149 145 F-----------DgfsamklrnyyllNPYESGEKGFKLLLTETDKDSLLALIKQRPMP-----------------------ENYSHRIMENFTFFDEQ 208
                  2...........1322333333335666677777777777777777777777777665.......................899*************9 PP

       DUF262 168 lksa......llsalktklslieieleseddedqayeiFerlNsrGvpLtasellkall 220
                  + +       l + l  kl ++ + l +   +d  + iFe++Ns+G++L++++l+++++
  VIMSS307149 209 IAKLgddlipLCRGL-AKLLIVDVALNRG--QDNPQLIFESMNSTGKALSQADLVRNFI 264
                  999899977733333.6667999999965..559***********************87 PP

  == domain 2  score: -2.4 bits;  conditional E-value: 0.24
       DUF262 139 s 139
                   
  VIMSS307149 450 L 450
                  1 PP



Or compare VIMSS307149 to CDD or PaperBLAST