VIMSS54357 has 663 amino acids
Query: DUF262 [M=199]
Accession: PF03235.18
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.6e-36 112.4 0.4 1.6e-36 112.4 0.4 2.4 2 VIMSS54357
Domain annotation for each sequence (and alignments):
>> VIMSS54357
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 112.4 0.4 1.6e-36 1.6e-36 1 199 [] 14 230 .. 14 230 .. 0.71
2 ? -1.6 1.5 0.14 0.14 104 104 .. 536 536 .. 373 631 .. 0.66
Alignments for each domain:
== domain 1 score: 112.4 bits; conditional E-value: 1.6e-36
DUF262 1 ledllskkksgfliPdyQRgyvWdeeqvedLiedike.....lrgyplGsivlwkeaededgkyeviDGQQRltTltlllkalee...d.......... 81
le++++++ + f iP+yQR+yvW++++v L+ dike + +y++G+i+ + ++d++++ye+iDGQQR+tTl+l+ a+++ +
VIMSS54357 14 LEKIYTDNYQ-FSIPSYQRPYVWSDDDVLLLFRDIKEacrlkEPNYFIGTILSSRIEQDGERIYELIDGQQRTTTLMLMTIAFKYagiKsdlaglavyt 111
5788899888.9*****************************************7666666**********************33343212233333433 PP
DUF262 82 ekekeeeeklklekreedkdffekllenekeelekleklkelngkkfkdlseeekseseknlikayelikek.................ai.eklklve 162
++ e++ +l+++ re+ ++ + l ++ + ++ ++++ ++ + k++ a+++++++ ++ +++ v+
VIMSS54357 112 SSDGEDKPRLQFSIREQVQQLLGGLAGLKNYQVPSK-----------ETIA---DNAYLKQMGVALDVLTKEveklksddgvsaeamgdYLyRQVQWVN 196
344444444444444444444444444444333332...........2221...23444444444444444466666667777777777677899**** PP
DUF262 163 ielddeddedeafeiFerlNsrGvpLsaadllkalll 199
+++++d +++F ++N+ G++L++ad+lka+l+
VIMSS54357 197 NIVPTQMD---LNRLFATMNTAGIQLEQADILKAKLF 230
***99999...***********************997 PP
== domain 2 score: -1.6 bits; conditional E-value: 0.14
DUF262 104 e 104
e
VIMSS54357 536 E 536
1 PP
Or compare VIMSS54357 to CDD or PaperBLAST