VIMSS54357 has 663 amino acids
Query: DUF262 [M=221]
Accession: PF03235.17
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.3e-36 112.1 0.4 2.3e-36 112.1 0.4 2.3 2 VIMSS54357
Domain annotation for each sequence (and alignments):
>> VIMSS54357
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 112.1 0.4 2.3e-36 2.3e-36 1 221 [] 14 230 .. 14 230 .. 0.80
2 ? -2.0 1.8 0.19 0.19 124 124 .. 542 542 .. 385 631 .. 0.63
Alignments for each domain:
== domain 1 score: 112.1 bits; conditional E-value: 2.3e-36
DUF262 1 ledllskskrglriPdfQRpyvWeeeqieeLiedlla.....lrgyplGsivlwskaadsageleviDGQQRltTltlllaatkeesekriknleaeie 94
le++++++ + + iP++QRpyvW+++++ L++d+++ +y++G+i+ ++ ++d+++++e+iDGQQR+tTl+l+ a +++ ik+ +a +
VIMSS54357 14 LEKIYTDNYQ-FSIPSYQRPYVWSDDDVLLLFRDIKEacrlkEPNYFIGTILSSRIEQDGERIYELIDGQQRTTTLMLMTIA---FKYAGIKSDLAGLA 108
5678888887.9***********************99****99**********6555555*******************999...55556666555555 PP
DUF262 95 k..ekeeededrlkrreresdkellqklirseklsleekeelselnsltkkdlakeekrneeknlikayevikeilksa..........llsalkekls 181
++ ed+ rl++++re+ ++ll l ++ + +ke+ ++ + + k++ a++v+++++++ + ++l+ +++
VIMSS54357 109 VytSSDGEDKPRLQFSIREQVQQLLGGLAGLKNYQVPSKETIAD--------------NAYLKQMGVALDVLTKEVEKLksddgvsaeaMGDYLYRQVQ 193
56656666677777777777777777766666666666544444..............5666666666666666666666668888888889999999* PP
DUF262 182 lieielededdedqayeiFerlNsrGvpLtasellkalll 221
++ ++ +d +++F+++N+ G +L+++++lka+l+
VIMSS54357 194 WVNNIVPTQMD---LNRLFATMNTAGIQLEQADILKAKLF 230
******99999...***********************997 PP
== domain 2 score: -2.0 bits; conditional E-value: 0.19
DUF262 124 e 124
+
VIMSS54357 542 K 542
1 PP
Or compare VIMSS54357 to CDD or PaperBLAST