VIMSS55555 has 638 amino acids
Query: DUF262 [M=221]
Accession: PF03235.14
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-20 60.6 1.5 1.4e-20 60.6 1.5 3.8 3 VIMSS55555
Domain annotation for each sequence (and alignments):
>> VIMSS55555
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -1.1 2.0 0.098 0.098 152 207 .. 127 189 .. 55 213 .. 0.52
2 ! 60.6 1.5 1.4e-20 1.4e-20 13 220 .. 270 411 .. 260 412 .. 0.86
3 ? -0.4 0.2 0.06 0.06 118 171 .. 495 544 .. 455 598 .. 0.53
Alignments for each domain:
== domain 1 score: -1.1 bits; conditional E-value: 0.098
DUF262 152 neeknlikayevieeilksa.......llsalktklslieieleseddedqayeiFerlNsrG 207
e + ++++++ +++ s+ lk+kl+ i+ + e+d d++++i e++ +
VIMSS55555 127 SETREIKRKIDRYRDFDVSQfyelhreQTIQLKHKLDSIFTKYPGESDVDAVKDIIEKIQELE 189
111111111111111111111111211111112334444445555566666666665554444 PP
== domain 2 score: 60.6 bits; conditional E-value: 1.4e-20
DUF262 13 riPdfQRpyv.WeeeqveeLiedllalkgyplGsivlw....skaads.ageleviDGQQRltTltlllaatkeesekriknleaeiekekeeededrl 105
+P++QR+ + W + + +Lie++ l+g pl+ +++ ++a+++ + + viDG QR+tTl+ ++ +
VIMSS55555 270 LTPEYQRKDRiWPIKDRARLIESI--LLGLPLPVFYFAeranKDAESEvDFDWVVIDGLQRTTTLVDFVQG---------------------------- 338
79*******99*************..************99865555558**********************............................ PP
DUF262 106 krreresdkellqkllrseklsleekeelaelnsltkkdlakeekrneeknlikayevieeilksallsalktklslieieleseddedqayeiFerlN 204
k++l+++++l + + ++kdl+++e+r+ +++ i + + + d+e+ + e+F r+N
VIMSS55555 339 -------------------KFALKDLNQLPKYDNCYFKDLPRKEQRKIREYQIHGHLIQVS-----------------------NDSEEMIRELFHRIN 395
...................67777777888888999****888888877777777666654.......................388999********* PP
DUF262 205 srGvpLtasellkall 220
+ G+ L+ +e++ al+
VIMSS55555 396 TYGKNLSYQEIRSALY 411
************9987 PP
== domain 3 score: -0.4 bits; conditional E-value: 0.06
DUF262 118 qkllrseklsleekeelaelnsltkkdlakeekrneeknlikayevieeilksa 171
++++++ + ++ ++ + + + ++ke+k +++k l+++++ i+ +++++
VIMSS55555 495 FQIIDYKLKESLKTISVIF----EDDAFKKEPKGKLNKILFELLVSIFAMMSDE 544
3333333222222111111....1122244444555555555555555444443 PP
Or compare VIMSS55555 to CDD or PaperBLAST