VIMSS55555 has 638 amino acids
Query: DUF262 [M=221] Accession: PF03235.17 Description: Protein of unknown function DUF262 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.1e-20 60.8 1.5 1.1e-20 60.8 1.5 3.8 3 VIMSS55555 Domain annotation for each sequence (and alignments): >> VIMSS55555 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -1.3 2.3 0.11 0.11 155 204 .. 130 186 .. 27 218 .. 0.56 2 ! 60.8 1.5 1.1e-20 1.1e-20 13 220 .. 270 411 .. 259 412 .. 0.86 3 ? -0.4 0.2 0.062 0.062 121 171 .. 498 544 .. 456 599 .. 0.52 Alignments for each domain: == domain 1 score: -1.3 bits; conditional E-value: 0.11 DUF262 155 knlikayevikeilksa.......llsalkeklslieielededdedqayeiFerlN 204 + ++++++ +++ s+ lk+kl+ i+ + e+d d++++i e++ VIMSS55555 130 REIKRKIDRYRDFDVSQfyelhreQTIQLKHKLDSIFTKYPGESDVDAVKDIIEKIQ 186 111111111111111111111111111111333444444444455555555555444 PP == domain 2 score: 60.8 bits; conditional E-value: 1.1e-20 DUF262 13 riPdfQRpyv.WeeeqieeLiedllalrgyplGsivlw....skaads.ageleviDGQQRltTltlllaatkeesekriknleaeiekekeeededrl 105 +P++QR+ + W +++ +Lie++ l+g pl+ +++ ++a+++ + + viDG QR+tTl+ + + VIMSS55555 270 LTPEYQRKDRiWPIKDRARLIESI--LLGLPLPVFYFAeranKDAESEvDFDWVVIDGLQRTTTLVDFVQG---------------------------- 338 89*******99*************..************99965555558**********************............................ PP DUF262 106 krreresdkellqklirseklsleekeelselnsltkkdlakeekrneeknlikayevikeilksallsalkeklslieielededdedqayeiFerlN 204 k++l+++++l ++++ ++kdl+++e+r+ +++ i + + + d+e+ + e+F r+N VIMSS55555 339 -------------------KFALKDLNQLPKYDNCYFKDLPRKEQRKIREYQIHGHLIQVS-----------------------NDSEEMIRELFHRIN 395 ...................6777777788888899*****888888887777777666655.......................388999********* PP DUF262 205 srGvpLtasellkall 220 + G+ L+ +e++ al+ VIMSS55555 396 TYGKNLSYQEIRSALY 411 ************9987 PP == domain 3 score: -0.4 bits; conditional E-value: 0.062 DUF262 121 irseklsleekeelselnsltkkdlakeekrneeknlikayevikeilksa 171 i+++ + ++ ++ ++ + ++ke+k +++k l+++++ i+ +++++ VIMSS55555 498 IDYKLKESLKTISVI----FEDDAFKKEPKGKLNKILFELLVSIFAMMSDE 544 222222222211111....11122244445555555555555555544444 PP
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