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Align VIMSS5893393 to PF03235 (DUF262)

VIMSS5893393 has 740 amino acids

Query:       DUF262  [M=221]
Accession:   PF03235.14
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    5.7e-36  110.8   0.2    5.7e-36  110.8   0.2    2.4  2  VIMSS5893393  


Domain annotation for each sequence (and alignments):
>> VIMSS5893393  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  110.8   0.2   5.7e-36   5.7e-36       2     220 ..      51     264 ..      50     265 .. 0.78
   2 ?   -1.2   1.8      0.11      0.11     108     108 ..     465     465 ..     357     561 .. 0.59

  Alignments for each domain:
  == domain 1  score: 110.8 bits;  conditional E-value: 5.7e-36
        DUF262   2 edllskskrglriPdfQRpyvWeeeqveeLiedlla......lkgyplGsivlw...skaads...ageleviDGQQRltTltlllaa...t..kee 81 
                    d+l++s++ ++iP++QR y+W+ +q+++L++d+ +       + +++Gs+v          +    + l+viDGQQRltT +ll++a   +  +ee
  VIMSS5893393  51 LDFLKRSQQ-FVIPIYQRTYSWTGQQCRQLWDDIIRagkrddISAHFIGSVVYIeqgL-Y--QvsgISPLLVIDGQQRLTTAMLLIEAlsrHlgEEE 143
                   578899888.*************************9*****99**********86642.2..2346999*******************332133222 PP

        DUF262  82 sekriknleaeiek.............ekeeededrlkrreresdkellqkllrseklsleekeelaelnsltkkdlakeekrneeknlikayevie 165
                                +             + +e+ e+ +k+  +e+dk+ l  l++++                          +n+ +++++++ +++
  VIMSS5893393 144 VF-----------DgfsamklrnyyllNPYESGEKGYKLLLTETDKDSLLALIKQRPMP-----------------------ENYSHRIMENFTFFD 206
                   22...........1233333334446667777777777777777777777777777765.......................899************ PP

        DUF262 166 eilksa......llsalktklslieieleseddedqayeiFerlNsrGvpLtasellkall 220
                   e++ +       l + l  kl ++ + l +   +d  + iFe++Ns+G++L++++l+++++
  VIMSS5893393 207 EQIAKLgddlipLCRGL-AKLLIVDVALNRG--QDNPQLIFESMNSTGKALSQADLVRNFI 264
                   *9999899977733333.6667999999965..559***********************87 PP

  == domain 2  score: -1.2 bits;  conditional E-value: 0.11
        DUF262 108 r 108
                   +
  VIMSS5893393 465 E 465
                   1 PP



Or compare VIMSS5893393 to CDD or PaperBLAST