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Align VIMSS5898924 to PF03235 (DUF262)

VIMSS5898924 has 735 amino acids

Query:       DUF262  [M=221]
Accession:   PF03235.14
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    1.5e-36  112.8   0.3    1.5e-36  112.8   0.3    2.2  2  VIMSS5898924  


Domain annotation for each sequence (and alignments):
>> VIMSS5898924  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  112.8   0.3   1.5e-36   1.5e-36       2     220 ..      47     260 ..      46     261 .. 0.78
   2 ?    0.3   0.3     0.038     0.038     115     172 ..     376     443 ..     328     537 .. 0.61

  Alignments for each domain:
  == domain 1  score: 112.8 bits;  conditional E-value: 1.5e-36
        DUF262   2 edllskskrglriPdfQRpyvWeeeqveeLiedlla......lkgyplGsivlw...skaads...ageleviDGQQRltTltlllaa...t..kee 81 
                    d+l++s++ ++iP++QR y+W+e+q+++L++d+ +       + +++Gs+v          +    + l+viDGQQRltT +ll++a   +  ++e
  VIMSS5898924  47 LDFLKRSQQ-FVIPIYQRTYSWTEQQCRQLWDDIIRagkrddISAHFIGSVVYIeqgL-Y--QvsgISPLLVIDGQQRLTTAMLLIEAlsrHlgEDE 139
                   578899888.*************************9*****99**********86642.2..2346999*******************332133222 PP

        DUF262  82 sekriknleaeiek.............ekeeededrlkrreresdkellqkllrseklsleekeelaelnsltkkdlakeekrneeknlikayevie 165
                                +             + +e+ e+ +k+  +e+dk+ l  l++++                          +n+ +++++++ +++
  VIMSS5898924 140 VF-----------DgfsamklrnyyllNPYESGEKGFKLLLTETDKDSLLALIKQRPMP-----------------------ENYSHRIMENFTFFD 202
                   22...........1322333333335666677777777777777777777777777765.......................8999*********** PP

        DUF262 166 eilksa......llsalktklslieieleseddedqayeiFerlNsrGvpLtasellkall 220
                   e++ +       l + l  kl ++ + l +   +d  + iFe++Ns+G++L++++l+++++
  VIMSS5898924 203 EQITKLgddlipLCRGL-AKLLIVDVALNRG--QDNPQLIFESMNSTGKALSQADLVRNFI 260
                   99888898877733333.6667999999965..559***********************87 PP

  == domain 2  score: 0.3 bits;  conditional E-value: 0.038
        DUF262 115 ellqkllrseklslee.keelaelnsltkkdl....akeekrneeknlikayevieeilksa.......l 172
                    +l  l+ ++k+s+++ ++ l+ ++  + + +       +++ ++k++   y+vi+++ k +       +
  VIMSS5898924 376 PFLLALYHDYKNSDLShEDFLSIIRLIESYVFrravCAIPTNSLNKTFATFYKVINKE-K-YlesiqvhF 443
                   4445555555555444444444444322222244445555566666666666666652.1.123333331 PP



Or compare VIMSS5898924 to CDD or PaperBLAST