VIMSS5898924 has 735 amino acids
Query: DUF262 [M=221]
Accession: PF03235.14
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-36 112.8 0.3 1.5e-36 112.8 0.3 2.2 2 VIMSS5898924
Domain annotation for each sequence (and alignments):
>> VIMSS5898924
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 112.8 0.3 1.5e-36 1.5e-36 2 220 .. 47 260 .. 46 261 .. 0.78
2 ? 0.3 0.3 0.038 0.038 115 172 .. 376 443 .. 328 537 .. 0.61
Alignments for each domain:
== domain 1 score: 112.8 bits; conditional E-value: 1.5e-36
DUF262 2 edllskskrglriPdfQRpyvWeeeqveeLiedlla......lkgyplGsivlw...skaads...ageleviDGQQRltTltlllaa...t..kee 81
d+l++s++ ++iP++QR y+W+e+q+++L++d+ + + +++Gs+v + + l+viDGQQRltT +ll++a + ++e
VIMSS5898924 47 LDFLKRSQQ-FVIPIYQRTYSWTEQQCRQLWDDIIRagkrddISAHFIGSVVYIeqgL-Y--QvsgISPLLVIDGQQRLTTAMLLIEAlsrHlgEDE 139
578899888.*************************9*****99**********86642.2..2346999*******************332133222 PP
DUF262 82 sekriknleaeiek.............ekeeededrlkrreresdkellqkllrseklsleekeelaelnsltkkdlakeekrneeknlikayevie 165
+ + +e+ e+ +k+ +e+dk+ l l++++ +n+ +++++++ +++
VIMSS5898924 140 VF-----------DgfsamklrnyyllNPYESGEKGFKLLLTETDKDSLLALIKQRPMP-----------------------ENYSHRIMENFTFFD 202
22...........1322333333335666677777777777777777777777777765.......................8999*********** PP
DUF262 166 eilksa......llsalktklslieieleseddedqayeiFerlNsrGvpLtasellkall 220
e++ + l + l kl ++ + l + +d + iFe++Ns+G++L++++l+++++
VIMSS5898924 203 EQITKLgddlipLCRGL-AKLLIVDVALNRG--QDNPQLIFESMNSTGKALSQADLVRNFI 260
99888898877733333.6667999999965..559***********************87 PP
== domain 2 score: 0.3 bits; conditional E-value: 0.038
DUF262 115 ellqkllrseklslee.keelaelnsltkkdl....akeekrneeknlikayevieeilksa.......l 172
+l l+ ++k+s+++ ++ l+ ++ + + + +++ ++k++ y+vi+++ k + +
VIMSS5898924 376 PFLLALYHDYKNSDLShEDFLSIIRLIESYVFrravCAIPTNSLNKTFATFYKVINKE-K-YlesiqvhF 443
4445555555555444444444444322222244445555566666666666666652.1.123333331 PP
Or compare VIMSS5898924 to CDD or PaperBLAST