VIMSS5915850 has 811 amino acids
Query: DUF262 [M=221]
Accession: PF03235.17
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.5e-41 126.8 2.2 1.4e-40 126.0 0.6 2.3 2 VIMSS5915850
Domain annotation for each sequence (and alignments):
>> VIMSS5915850
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 126.0 0.6 1.4e-40 1.4e-40 1 220 [. 8 221 .. 8 222 .. 0.78
2 ? -3.2 0.0 0.42 0.42 110 132 .. 267 290 .. 229 310 .. 0.60
Alignments for each domain:
== domain 1 score: 126.0 bits; conditional E-value: 1.4e-40
DUF262 1 ledllskskrglriPdfQRpyvWeeeqieeLiedlla.....lrgyplGsivlwskaadsageleviDGQQRltTltlllaatkeesekriknleae 92
+++++++++r+l+iP +QR+y W+e+q+++L++dl + +r +++G++v + +++ ++ viDGQQRltT++l++ a l+
VIMSS5915850 8 ITKVYDGKHRTLEIPVYQRNYDWTEKQCSRLFDDLSEvvkenHRQHFFGAVVG---KPQGSWTWVVIDGQQRLTTISLFMLA-----------LVHS 90
567888999989***********************99****************...7777**********************...........2222 PP
DUF262 93 iekekeeededrlkrreresdkellqklirseklslee.keelselnsltkkdlakeekrneeknlikayevikeilksa......llsalkeklsl 182
++ + ee e + ++++ ++l ++++ +l+ +++ +++n++++k + +e + e +nl ++y+++++ lk l++a+ ekl +
VIMSS5915850 91 LRASEVEEGEFNAGYNIDLATLIEDDYLRSGNEGNLKFkLKPVKNDNEAYQKLFGPESEFIESSNLTANYRYFRNVLKATdltaaqLWEAI-EKLRV 186
2222333333333333333333333333333333333335556666666777778888999**************9998899999988888.99999 PP
DUF262 183 ieielededdedqayeiFerlNsrGvpLtasellkall 220
+ + le+ dd ++iFe+lNs+G++L+ ++ +++l+
VIMSS5915850 187 MYLDLEEFDD---PQRIFESLNSTGLELSEADKVRNLV 221
9999998888...**********************987 PP
== domain 2 score: -3.2 bits; conditional E-value: 0.42
DUF262 110 resdkellqklirseklslee.ke 132
+++ e ++k+ir++kl e ++
VIMSS5915850 267 KQDVYEEFKKFIRNSKLPVEFiLD 290
334455566666666655555333 PP
Or compare VIMSS5915850 to CDD or PaperBLAST