VIMSS5915850 has 811 amino acids
Query: DUF262 [M=221]
Accession: PF03235.14
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.8e-41 126.8 2.3 1.3e-40 126.1 0.7 2.3 2 VIMSS5915850
Domain annotation for each sequence (and alignments):
>> VIMSS5915850
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 126.1 0.7 1.3e-40 1.3e-40 1 220 [. 8 221 .. 8 222 .. 0.78
2 ? -3.3 0.0 0.47 0.47 110 130 .. 267 287 .. 229 308 .. 0.59
Alignments for each domain:
== domain 1 score: 126.1 bits; conditional E-value: 1.3e-40
DUF262 1 ledllskskrglriPdfQRpyvWeeeqveeLiedlla.....lkgyplGsivlwskaadsageleviDGQQRltTltlllaatkeesekriknleae 92
+++++++++r+l+iP +QR+y W+e+q+++L++dl + ++ +++G++v + +++ ++ viDGQQRltT++l++ a l+
VIMSS5915850 8 ITKVYDGKHRTLEIPVYQRNYDWTEKQCSRLFDDLSEvvkenHRQHFFGAVVG---KPQGSWTWVVIDGQQRLTTISLFMLA-----------LVHS 90
567888899989***********************99****************...7777**********************...........3333 PP
DUF262 93 iekekeeededrlkrreresdkellqkllrseklslee.keelaelnsltkkdlakeekrneeknlikayevieeilksa......llsalktklsl 182
++ + ee e + ++++ ++l ++++ +l+ +++ +++n++++k + +e + e +nl ++y+++++ lk l++a+ +kl +
VIMSS5915850 91 LRASEVEEGEFNAGYNIDLATLIEDDYLRSGNEGNLKFkLKPVKNDNEAYQKLFGPESEFIESSNLTANYRYFRNVLKATdltaaqLWEAI-EKLRV 186
33333333333333333333333333333333333333355566666677777788899****************9999899999988888.99999 PP
DUF262 183 ieieleseddedqayeiFerlNsrGvpLtasellkall 220
+ + le+ dd ++iFe+lNs+G++L+ ++ +++l+
VIMSS5915850 187 MYLDLEEFDD---PQRIFESLNSTGLELSEADKVRNLV 221
9999998888...**********************987 PP
== domain 2 score: -3.3 bits; conditional E-value: 0.47
DUF262 110 resdkellqkllrseklslee 130
+++ e ++k++r++kl e
VIMSS5915850 267 KQDVYEEFKKFIRNSKLPVEF 287
334445555555555555544 PP
Or compare VIMSS5915850 to CDD or PaperBLAST