PaperBLAST – Find papers about a protein or its homologs

 

Align WP_000071070.1 to PF03235 (DUF262)

WP_000071070.1 has 171 amino acids

Query:       DUF262  [M=221]
Accession:   PF03235.17
Description: Protein of unknown function DUF262
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      3e-19   56.2   0.0    4.9e-19   55.5   0.0    1.4  1  WP_000071070.1  


Domain annotation for each sequence (and alignments):
>> WP_000071070.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   55.5   0.0   4.9e-19   4.9e-19      16      77 ..      37      99 ..      32     164 .. 0.77

  Alignments for each domain:
  == domain 1  score: 55.5 bits;  conditional E-value: 4.9e-19
          DUF262 16 dfQRpyvWeeeqieeLiedllalrgyplGsivlw..skaads.....ageleviDGQQRltTltlllaa 77
                    ++QR+yvW  e+++ +++ +   +g+p+Gs+ l   +    +      +  ev+DG+QRltTl  ++ +
  WP_000071070.1 37 NYQRGYVWGHEEQQAFLNAV--ISGFPIGSVALAkaP----DwcsreLPYIEVVDGKQRLTTLKKFITN 99
                    6*******************..***********6641....333356999*****************99 PP



Or compare WP_000071070.1 to CDD or PaperBLAST